RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PPP1R13LQ8WUF5 828 aa4.6□□□□□ -1.67
HMGB1P9-201ENST00000429856 RNF141Q8WVD5 230 aa4.6□□□□□ -1.67
HMGB1P9-201ENST00000429856 SEC16BQ96JE7 1060 aa4.6□□□□□ -1.67
HMGB1P9-201ENST00000429856 ZNF552Q9H707 407 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P9-201ENST00000429856 CNNM2Q9H8M5 875 aa4.6□□□□□ -1.67
HMGB1P9-201ENST00000429856 MYOCOSA0A1B0GUC4 107 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 PSPNO60542 156 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 DNAJA2O60884 412 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 PDE6BP35913 854 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 RNF4P78317 190 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 VPS37DQ86XT2 251 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 SPPL2CQ8IUH8 684 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 TAB3Q8N5C8 712 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 RBBP8NLQ8NC74 664 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 OR6P1Q8NGX9 317 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 DHX38Q92620 1227 aaKnown RBP4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 ATG4CQ96DT6 458 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 C8orf37Q96NL8 207 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 CRBNQ96SW2 442 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 ASPNQ9BXN1 380 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 XYLT2Q9H1B5 865 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 ACBD3Q9H3P7 528 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 C19orf44Q9H6X5 657 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 CAPN10Q9HC96 672 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 GINM1Q9NU53 330 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 KCNH3Q9ULD8 1083 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 STRIP2Q9ULQ0 834 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 EFR3BQ9Y2G0 817 aa4.59□□□□□ -1.67
HMGB1P9-201ENST00000429856 FITM1A5D6W6 292 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 TNFRSF10CO14798 259 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 NME1P15531 152 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 NFKB2Q00653 900 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 TNK2Q07912 1038 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 SNX17Q15036 470 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 FBXW10Q5XX13 1052 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 INTS3Q68E01 1043 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 FAM177A1Q8N128 213 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 SREK1Q8WXA9 508 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 KREMEN1Q96MU8 473 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 KIF2CQ99661 725 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 TM9SF2Q99805 663 aa4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 SRRTQ9BXP5 876 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 TRIT1Q9H3H1 467 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 YBX2Q9Y2T7 364 aaKnown RBP4.58□□□□□ -1.68
HMGB1P9-201ENST00000429856 OTOL1A6NHN0 477 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 TPP2P29144 1249 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 NASPP49321 788 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 EIF6P56537 245 aaKnown RBP4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 NR0B2Q15466 257 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 NAALADL2Q58DX5 795 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 INTS4Q96HW7 963 aaKnown RBP4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 SGPP1Q9BX95 441 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 GCM1Q9NP62 436 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 PPT2Q9UMR5 302 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 IRAK3Q9Y616 596 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 SLC12A7Q9Y666 1083 aa4.57□□□□□ -1.68
HMGB1P9-201ENST00000429856 CLEC3AO75596 197 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 UBOX5O94941 541 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 ATF4P18848 351 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 GUCY2CP25092 1073 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 KRTAP10-2P60368 255 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 ZC3H6P61129 1189 aaKnown RBP4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 SPATS1Q496A3 300 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 CPLX3Q8WVH0 158 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 SIGLEC10Q96LC7 697 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 DHRS1Q96LJ7 313 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 ANTXR1Q9H6X2 564 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 SP110Q9HB58 689 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 GPATCH2Q9NW75 528 aa4.56□□□□□ -1.68
HMGB1P9-201ENST00000429856 ZGLP1P0C6A0 271 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 GIPRP48546 466 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 AFF3P51826 1226 aaKnown RBP4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 SSPNQ14714 243 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 LSRQ86X29 649 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 ZDHHC14Q8IZN3 488 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 C19orf47Q8N9M1 422 aaKnown RBP4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 DTWD2Q8NBA8 298 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 SLC43A3Q8NBI5 491 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 VWCEQ96DN2 955 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 Q96M66 194 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 DRC1Q96MC2 740 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 TINF2Q9BSI4 451 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 GPR62Q9BZJ7 368 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 ASCC2Q9H1I8 757 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 DUSP13Q9UII6 198 aa4.55□□□□□ -1.68
HMGB1P9-201ENST00000429856 POLR2BP30876 1174 aaKnown RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 ARID5AQ03989 594 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 CHRNEQ04844 493 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 PLP2Q04941 152 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 EGR3Q06889 387 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 BBS9Q3SYG4 887 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 NBPF12Q5TAG4 269 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 CCDC81Q6ZN84 652 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SP8Q8IXZ3 490 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 ENOX1Q8TC92 643 aaKnown RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SMARCC1Q92922 1105 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 DACT3Q96B18 629 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SLC6A18Q96N87 628 aa4.54□□□□□ -1.68
HMGB1P9-201ENST00000429856 SLC9A7Q96T83 725 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms