RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 KCNJ18B7U540 433 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 G3V3G9 751 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 TADA3O75528 432 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 SLFN14P0C7P3 912 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 CAPN2P17655 700 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 KIF5BP33176 963 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 KCNJ12Q14500 433 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 DCAF8Q5TAQ9 597 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 RAD9BQ6WBX8 426 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 CCDC148Q8NFR7 591 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 MMRN2Q9H8L6 949 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 INTS13Q9NVM9 706 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
HPS4-205ENST00000429411 NAPAP54920 295 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 ST5P78524 1137 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 TDRD12Q587J7 1177 aaKnown RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 DYMQ7RTS9 669 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 MAPKAPK5Q8IW41 473 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 TRIM10Q9UDY6 481 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 A0A087X0B3 334 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 ANKRD65E5RJM6 399 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 VEGFAP15692 232 aaPredicted RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 IL6STP40189 918 aaPredicted RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 CCDC96Q2M329 555 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 STAG1Q8WVM7 1258 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 NAPGQ99747 312 aaPredicted RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 RNF26Q9BY78 433 aaPredicted RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.05□□□□□ -0.96
HPS4-205ENST00000429411 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
HPS4-205ENST00000429411 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 WNT7AO00755 349 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 PSMA7O14818 248 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 SRGAP2O75044 1071 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 SCG2P13521 617 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 HIBADHP31937 336 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 RNASE9P60153 205 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 PICALMQ13492 652 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 KRT31Q15323 416 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CCDC181Q5TID7 509 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 TRIM65Q6PJ69 517 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CSGALNACT2Q8N6G5 542 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 ANKRD13CQ8N6S4 541 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 SLC44A5Q8NCS7 719 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 CENPHQ9H3R5 247 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 USP17L3A6NCW0 530 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 USP17L4A6NCW7 530 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 TUBB4AP04350 444 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 KLRK1P26718 216 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CYP27A1Q02318 531 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 PDE4DQ08499 809 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CCDC70Q6NSX1 233 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 USP17L1Q7RTZ2 530 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CEP112Q8N8E3 955 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 NOC3LQ8WTT2 800 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 TGFBRAP1Q8WUH2 860 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 HSD3B7Q9H2F3 369 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 L2HGDHQ9H9P8 463 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 TCRBV5S4A2TA0A5A2 114 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 MYO1BO43795 1136 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 AKR1B10O60218 316 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CCNT1O60563 726 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 RPS6KA4O75676 772 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 TXKP42681 527 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 COPB1P53618 953 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 HNRNPH2P55795 449 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 IKQ13123 557 aaPredicted RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 SPA17Q15506 151 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 PTPROQ16827 1216 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CC2D1AQ6P1N0 951 aaPredicted RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 PNMA1Q8ND90 353 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 FERMT2Q96AC1 680 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CHP1Q99653 195 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 CRACR2AQ9BSW2 395 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 SEC63Q9UGP8 760 aaKnown RBP9.04□□□□□ -0.96
HPS4-205ENST00000429411 RSPH14Q9UHP6 348 aa9.04□□□□□ -0.96
HPS4-205ENST00000429411 B4DLN1 442 aa9.03□□□□□ -0.96
HPS4-205ENST00000429411 MPHOSPH10O00566 681 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
HPS4-205ENST00000429411 RPN1P04843 607 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms