RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 C9orf131Q5VYM1 1079 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 TDRD10Q5VZ19 366 aaKnown RBP8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 C7orf61Q8IZ16 206 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 MAP6Q96JE9 813 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 YBX2Q9Y2T7 364 aaKnown RBP8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 ERCC6Q03468 1493 aa8.17□□□□□ -1.1
HMGB3P5-201ENST00000428894 USP2O75604 605 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 TSPAN15O95858 294 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 GUCY2CP25092 1073 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 GALK1P51570 392 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 CCDC81Q6ZN84 652 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 SHISA4Q96DD7 197 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 INTS4Q96HW7 963 aaKnown RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 KIAA1522Q9P206 1035 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 EFR3BQ9Y2G0 817 aa8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P5-201ENST00000428894 NOTOA8MTQ0 251 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 NFIBO00712 420 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 TMEM253P0C7T8 217 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 C1QTNF9P0C862 333 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 PDE6BP35913 854 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 CTSKP43235 329 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 KIR2DL1P43626 348 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 KIR2DL2P43627 348 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 CEP128Q6ZU80 1094 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 IRF2BP1Q8IU81 584 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 HHIPL1Q96JK4 782 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 SPATA32Q96LK8 384 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 CRBNQ96SW2 442 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 PRR13Q9NZ81 148 aa8.15□□□□□ -1.1
HMGB3P5-201ENST00000428894 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 KRT1P04264 644 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 BMP8BP34820 402 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 PPFIBP1Q86W92 1011 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 SMARCC1Q92922 1105 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 KCNN1Q92952 543 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 GPRASP2Q96D09 838 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 SLC26A8Q96RN1 970 aa8.14□□□□□ -1.11
HMGB3P5-201ENST00000428894 SHOXO15266 292 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 NRDCO43847 1150 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 TP53P04637 393 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 VAV1P15498 845 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 AXDND1Q5T1B0 1012 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 NLRX1Q86UT6 975 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 FAM86C1Q9NVL1 165 aa8.13□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF205O95201 554 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 EFEMP2O95967 443 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 GSNP06396 782 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 ENDOUP21128 410 aaKnown RBP8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 SOX9P48436 509 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 EIF6P56537 245 aaKnown RBP8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 NOL9Q5SY16 702 aaKnown RBP8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 CILP2Q8IUL8 1156 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 RASGRP4Q8TDF6 673 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 FCRL2Q96LA5 508 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 CDADC1Q9BWV3 514 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 TNFRSF10DQ9UBN6 386 aa8.12□□□□□ -1.11
HMGB3P5-201ENST00000428894 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 ETV2O00321 342 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 RTP1P59025 263 aa8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 ATG14Q6ZNE5 492 aa8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 TOX2Q96NM4 488 aa8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF552Q9H707 407 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF214Q9UL59 606 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P5-201ENST00000428894 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 FADS2P1A8MWK0 482 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 CFPP27918 469 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF445P59923 1031 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 CWF19L1Q69YN2 538 aaKnown RBP8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 BRF1Q92994 677 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 SRRTQ9BXP5 876 aaKnown RBP8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 MCOLN1Q9GZU1 580 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 GP6Q9HCN6 339 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 CRTAC1Q9NQ79 661 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P5-201ENST00000428894 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 NPIPB6E9PJ23 425 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 H0Y8X5 98 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 CD247P20963 164 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 GLDCP23378 1020 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 GJA8P48165 433 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 GIPRP48546 466 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 NASPP49321 788 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 ADGRF1Q5T601 910 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 PLCD4Q9BRC7 762 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms