RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 SLC38A10Q9HBR0 1119 aa23.2■■□□□ 1.3
PPP1CB-206ENST00000427786 H0YGN5 161 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 BMP3P12645 472 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 MFAP1P55081 439 aaKnown RBP23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 TTC22Q5TAA0 569 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 CWC27Q6UX04 472 aaKnown RBP23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 NECAB2Q7Z6G3 386 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 MAML3Q96JK9 1138 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 IL25Q9H293 177 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 STX8Q9UNK0 236 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 RIPK3Q9Y572 518 aa23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 RANBP2P49792 3224 aaKnown RBP23.19■■□□□ 1.3
PPP1CB-206ENST00000427786 HIP1O00291 1037 aa23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 RANBP6O60518 1105 aaKnown RBP23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 HAND2P61296 217 aa23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 SNRNP48Q6IEG0 339 aaKnown RBP23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 RASGRP2Q7LDG7 609 aa23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 MMP19Q99542 508 aa23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 TCP11L1Q9NUJ3 509 aa23.18■■□□□ 1.3
PPP1CB-206ENST00000427786 PFASO15067 1338 aa23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 PCP11498 1178 aaKnown RBP23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 COL6A1P12109 1028 aa23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 ZNF792Q3KQV3 632 aa23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 DPF3Q92784 378 aa23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 KIFC2Q96AC6 838 aa23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 DDX20Q9UHI6 824 aaKnown RBP23.17■■□□□ 1.3
PPP1CB-206ENST00000427786 NEDD4P46934 1319 aa23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 PLA2G6O60733 806 aa23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 OAZ1P54368 228 aa23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 AKNAD1Q5T1N1 836 aa23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 SLC5A4Q9NY91 659 aa23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 DIS3Q9Y2L1 958 aaKnown RBP23.16■■□□□ 1.3
PPP1CB-206ENST00000427786 DNAJC25-GNG10A0A024R161 153 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 TMEM232C9JQI7 657 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 MSCO60682 206 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 SLC34A2O95436 690 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 PGK2P07205 417 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 MCCP23508 829 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 SLC1A4P43007 532 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 STAT2P52630 851 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 KCTD2Q14681 263 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 C11orf49Q9H6J7 331 aa23.15■■□□□ 1.3
PPP1CB-206ENST00000427786 ZNF536O15090 1300 aa23.14■■□□□ 1.3
PPP1CB-206ENST00000427786 ZBED4O75132 1171 aa23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 FDX1P10109 184 aa23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 RCSD1Q6JBY9 416 aa23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 FAM160B2Q86V87 743 aa23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 RAVER2Q9HCJ3 691 aaKnown RBP23.14■■□□□ 1.29
PPP1CB-206ENST00000427786 KCTD1Q719H9 257 aa23.13■■□□□ 1.29
PPP1CB-206ENST00000427786 CPXCR1Q8N123 301 aa23.13■■□□□ 1.29
PPP1CB-206ENST00000427786 TMEM47Q9BQJ4 181 aa23.13■■□□□ 1.29
PPP1CB-206ENST00000427786 TOMM22Q9NS69 142 aa23.13■■□□□ 1.29
PPP1CB-206ENST00000427786 LCTP09848 1927 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 SEPT4O43236 478 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 MFSD6Q6ZSS7 791 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 DCAF4Q8WV16 495 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 FGD4Q96M96 766 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 PRO3102Q9H379 93 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 RNF41Q9H4P4 317 aaPredicted RBP23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 NRBP1Q9UHY1 535 aa23.12■■□□□ 1.29
PPP1CB-206ENST00000427786 RAD50Q92878 1312 aa23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 LRRC37A2A6NM11 1700 aa23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 TOP1P11387 765 aaKnown RBP23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 NT5C2P49902 561 aa23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 HABP4Q5JVS0 413 aaKnown RBP23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 CHURC1Q8WUH1 139 aa23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 TINF2Q9BSI4 451 aa23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 COLQQ9Y215 455 aaPredicted RBP23.11■■□□□ 1.29
PPP1CB-206ENST00000427786 ZNF213O14771 459 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 EVI5O60447 810 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 CNGA1P29973 690 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 PRAMEF19Q5SWL8 479 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 BTNL9Q6UXG8 535 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 CHST13Q8NET6 341 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 CHMP4CQ96CF2 233 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 FBXO40Q9UH90 709 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 PRR12Q9ULL5 1215 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 NR2E3Q9Y5X4 410 aa23.1■■□□□ 1.29
PPP1CB-206ENST00000427786 MCM3APO60318 1980 aa23.09■■□□□ 1.29
PPP1CB-206ENST00000427786 SNHG28P0DPA3 235 aa23.09■■□□□ 1.29
PPP1CB-206ENST00000427786 ESR2Q92731 530 aa23.09■■□□□ 1.29
PPP1CB-206ENST00000427786 TTC14Q96N46 770 aa23.09■■□□□ 1.29
PPP1CB-206ENST00000427786 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
PPP1CB-206ENST00000427786 DNM1LO00429 736 aa23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 PDHBP11177 359 aa23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 MAMDC4Q6UXC1 1216 aa23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 MSL3Q8N5Y2 521 aaKnown RBP23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 AGBL1Q96MI9 1066 aa23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 CTDP1Q9Y5B0 961 aaPredicted RBP23.08■■□□□ 1.29
PPP1CB-206ENST00000427786 SYNGAP1Q96PV0 1343 aa23.08■■□□□ 1.28
PPP1CB-206ENST00000427786 ZNF865P0CJ78 1059 aaPredicted RBP23.07■■□□□ 1.28
PPP1CB-206ENST00000427786 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
PPP1CB-206ENST00000427786 CHMLP26374 656 aa23.07■■□□□ 1.28
PPP1CB-206ENST00000427786 IKQ13123 557 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms