RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 FOXP2O15409 715 aa21.11■□□□□ 0.97
GPC1-203ENST00000425056 SLC3A2P08195 630 aaKnown RBP21.11■□□□□ 0.97
GPC1-203ENST00000425056 TSPY3P0CV98 308 aa21.11■□□□□ 0.97
GPC1-203ENST00000425056 TSPY8P0CW00 308 aa21.11■□□□□ 0.97
GPC1-203ENST00000425056 MDM2Q00987 491 aaPredicted RBP21.11■□□□□ 0.97
GPC1-203ENST00000425056 SNX17Q15036 470 aa21.11■□□□□ 0.97
GPC1-203ENST00000425056 LRRC47Q8N1G4 583 aaKnown RBP21.11■□□□□ 0.97
GPC1-203ENST00000425056 RIPK3Q9Y572 518 aa21.11■□□□□ 0.97
GPC1-203ENST00000425056 SLC39A5Q6ZMH5 540 aa21.1■□□□□ 0.97
GPC1-203ENST00000425056 MSL3Q8N5Y2 521 aaKnown RBP21.1■□□□□ 0.97
GPC1-203ENST00000425056 CRBNQ96SW2 442 aa21.1■□□□□ 0.97
GPC1-203ENST00000425056 SLC38A10Q9HBR0 1119 aa21.1■□□□□ 0.97
GPC1-203ENST00000425056 FEM1BQ9UK73 627 aa21.1■□□□□ 0.97
GPC1-203ENST00000425056 DNAJC25-GNG10A0A024R161 153 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 ZBED4O75132 1171 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 ZNF865P0CJ78 1059 aaPredicted RBP21.09■□□□□ 0.97
GPC1-203ENST00000425056 RARBP10826 455 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 TAL1P17542 331 aaPredicted RBP21.09■□□□□ 0.97
GPC1-203ENST00000425056 KIFC2Q96AC6 838 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 XPNPEP3Q9NQH7 507 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 ATP11BQ9Y2G3 1177 aa21.09■□□□□ 0.97
GPC1-203ENST00000425056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.09■□□□□ 0.97
GPC1-203ENST00000425056 LAMA2P24043 3122 aaKnown RBP21.09■□□□□ 0.97
GPC1-203ENST00000425056 SYNGAP1Q96PV0 1343 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
GPC1-203ENST00000425056 AKR1A1P14550 325 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 ADCYAP1R1P41586 468 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 OAZ1P54368 228 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 TFAP4Q01664 338 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
GPC1-203ENST00000425056 ANKRD45Q5TZF3 282 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 C1orf53Q5VUE5 145 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 CCDC129Q6ZRS4 1044 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 CPXCR1Q8N123 301 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 LBHD1Q9BQE6 289 aaPredicted RBP21.08■□□□□ 0.97
GPC1-203ENST00000425056 ZBTB47Q9UFB7 747 aaPredicted RBP21.08■□□□□ 0.97
GPC1-203ENST00000425056 PRKAG2Q9UGJ0 569 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 PHF24Q9UPV7 400 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 CNPY2Q9Y2B0 182 aa21.08■□□□□ 0.97
GPC1-203ENST00000425056 MCM3APO60318 1980 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 BMP3P12645 472 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 SLFN13Q68D06 897 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 MAMDC4Q6UXC1 1216 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 ZNF467Q7Z7K2 595 aaPredicted RBP21.07■□□□□ 0.96
GPC1-203ENST00000425056 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 DDX11Q96FC9 970 aa21.07■□□□□ 0.96
GPC1-203ENST00000425056 RAVER2Q9HCJ3 691 aaKnown RBP21.07■□□□□ 0.96
GPC1-203ENST00000425056 CTDP1Q9Y5B0 961 aaPredicted RBP21.07■□□□□ 0.96
GPC1-203ENST00000425056 FDX1P10109 184 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 PDE1AP54750 535 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 TRIM60Q495X7 471 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 RNF180Q86T96 592 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 FBXO40Q9UH90 709 aa21.06■□□□□ 0.96
GPC1-203ENST00000425056 SNAI1O95863 264 aaPredicted RBP21.05■□□□□ 0.96
GPC1-203ENST00000425056 PGK1P00558 417 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 STAT2P52630 851 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 CHST13Q8NET6 341 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 FERMT2Q96AC1 680 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 LENG1Q96BZ8 264 aaPredicted RBP21.05■□□□□ 0.96
GPC1-203ENST00000425056 PDLIM7Q9NR12 457 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 ANAPC4Q9UJX5 808 aa21.05■□□□□ 0.96
GPC1-203ENST00000425056 ADAMTS4O75173 837 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 CTDSPL2Q05D32 466 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 FAM160B2Q86V87 743 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 DEFB123Q8N688 67 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 FGD4Q96M96 766 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 HELLSQ9NRZ9 838 aa21.04■□□□□ 0.96
GPC1-203ENST00000425056 TSPY2A6NKD2 308 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 TMEM232C9JQI7 657 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 SLC1A4P43007 532 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 SLC4A3P48751 1232 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 TICAM2Q86XR7 235 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 ANKRD35Q8N283 1001 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 CHURC1Q8WUH1 139 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 PRDM5Q9NQX1 630 aaPredicted RBP21.03■□□□□ 0.96
GPC1-203ENST00000425056 IL17RBQ9NRM6 502 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 STX8Q9UNK0 236 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 SYNRGQ9UMZ2 1314 aa21.03■□□□□ 0.96
GPC1-203ENST00000425056 A0A1W2PQ45 241 aaPredicted RBP21.02■□□□□ 0.96
GPC1-203ENST00000425056 A0A1W2PQY0 241 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 ORC4O43929 436 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 PLA2G6O60733 806 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 NOVP48745 357 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 ALX1Q15699 326 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 Q7L0L9 218 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 STAG1Q8WVM7 1258 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 TSEN34Q9BSV6 310 aaKnown RBP21.02■□□□□ 0.96
GPC1-203ENST00000425056 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
GPC1-203ENST00000425056 FAM184BQ9ULE4 1060 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
GPC1-203ENST00000425056 TACC3Q9Y6A5 838 aa21.02■□□□□ 0.96
GPC1-203ENST00000425056 ZNF536O15090 1300 aa21.02■□□□□ 0.95
GPC1-203ENST00000425056 LRRC37A2A6NM11 1700 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 A0A0D9SFI3 127 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 NMT2O60551 498 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 FGRP09769 529 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 MCCP23508 829 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms