RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CUL4BQ13620 913 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 WLSQ5T9L3 541 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 BRINP3Q76B58 766 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 GOLGA6L7A0A1B0GV03 622 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 PDIA6Q15084 440 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 WDR59Q6PJI9 974 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 TEX11Q8IYF3 940 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 CAPN6Q9Y6Q1 641 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 ANKRD33BA6NCL7 494 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 ZNF233A6NK53 670 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 GCKP35557 465 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 INHBEP58166 350 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 QPCTQ16769 361 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 CYB5D1Q6P9G0 228 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 PLIN2Q99541 437 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 BAIAP2L1Q9UHR4 511 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 TPX2Q9ULW0 747 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
SEC61A1-202ENST00000424880 PSMD14O00487 310 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 CRYMQ14894 314 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 HLFQ16534 295 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 CDKAL1Q5VV42 579 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 MYCBPAPQ8TBZ2 947 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 NUP133Q8WUM0 1156 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 LRWD1Q9UFC0 647 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 KCNJ18B7U540 433 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 PRDM1O75626 825 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 RASSF9O75901 435 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 MOCS3O95396 460 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 PTPREP23469 700 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 TBC1D8BQ0IIM8 1120 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 KCNJ12Q14500 433 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 SNCBQ16143 134 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 MAEAQ7L5Y9 396 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 MAATS1Q7Z4T9 603 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 NLRP14Q86W24 1093 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 FMNL3Q8IVF7 1028 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 ZBTB43O43298 467 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 TTF1Q15361 905 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-202ENST00000424880 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 GLI1P08151 1106 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 SNX1Q13596 522 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 EPN3Q9H201 632 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 MYH10P35580 1976 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 GPAA1O43292 621 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 BUB1O43683 1085 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 OPA1O60313 960 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 NR1D1P20393 614 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 MCM3P25205 808 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 ZAP70P43403 619 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 ZNF174Q15697 407 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 HAUS4Q9H6D7 363 aa12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-202ENST00000424880 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 PPP1R37O75864 691 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 SARNPP82979 210 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 GUCY2DQ02846 1103 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 CTDSPL2Q05D32 466 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 CCDC181Q5TID7 509 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms