RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 KDM2BQ8NHM5 1336 aa5.88□□□□□ -1.47
SDCBPP2-201ENST00000424643 LTBP3Q9NS15 1303 aa5.88□□□□□ -1.47
SDCBPP2-201ENST00000424643 PBRM1Q86U86 1689 aa5.88□□□□□ -1.47
SDCBPP2-201ENST00000424643 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 RAG1P15918 1043 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 FUT4P22083 530 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 NKPD1Q17RQ9 610 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 PLEKHG4Q58EX7 1191 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 HOMER1Q86YM7 354 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 HID1Q8IV36 788 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 SPACA3Q8IXA5 215 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 PRDM5Q9NQX1 630 aaPredicted RBP5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 ADAMTS6Q9UKP5 1117 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 TPX2Q9ULW0 747 aaKnown RBP5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 GRIN2BQ13224 1484 aa5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 EIF4G3O43432 1585 aaKnown RBP5.87□□□□□ -1.47
SDCBPP2-201ENST00000424643 GNAT3A8MTJ3 354 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PRR33A8MZF0 331 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 DIAPH1O60610 1272 aaKnown RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 POLR2BP30876 1174 aaKnown RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 SSRP1Q08945 709 aaKnown RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 SQSTM1Q13501 440 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 NCAPHQ15003 741 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 C2orf27AQ580R0 203 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 RNF187Q5TA31 235 aaPredicted RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PRAMEF13Q5VWM6 474 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 KIAA1211LQ6NV74 962 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 EEPD1Q7L9B9 569 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PHACTR4Q8IZ21 702 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PI4K2BQ8TCG2 481 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 GPATCH3Q96I76 525 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PHAXQ9H814 394 aaKnown RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 PRDM7Q9NQW5 492 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 TJP2Q9UDY2 1190 aa5.86□□□□□ -1.47
SDCBPP2-201ENST00000424643 ADAMTS12P58397 1594 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 FHAD1B1AJZ9 1412 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 ITGB5P18084 799 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 PTPROQ16827 1216 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 MCATQ8IVS2 390 aaKnown RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 THAP3Q8WTV1 239 aaPredicted RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 TMEM87BQ96K49 555 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 DPH2Q9BQC3 489 aaPredicted RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 ZMYM5Q9UJ78 669 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 PTCH2Q9Y6C5 1203 aa5.85□□□□□ -1.47
SDCBPP2-201ENST00000424643 CEP162Q5TB80 1403 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 SUSD5O60279 629 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 CST3P01034 146 aaPredicted RBP5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 CAP2P40123 477 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 SLC7A5Q01650 507 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 IKZF1Q13422 519 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 GNPTABQ3T906 1256 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 SFRP5Q5T4F7 317 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 CDKAL1Q5VV42 579 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 SLC6A19Q695T7 634 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 LETMD1Q6P1Q0 360 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 MRPL41Q8IXM3 137 aaKnown RBP5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 SLFN12Q8IYM2 578 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 MFSD2AQ8NA29 543 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 KLHL6Q8WZ60 621 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 RC3H2Q9HBD1 1191 aaKnown RBP5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
SDCBPP2-201ENST00000424643 MAGI1Q96QZ7 1491 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 FAM155AB1AL88 458 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 PAPLNO95428 1278 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 CBX7O95931 251 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 IBSPP21815 317 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 SLC10A6Q3KNW5 377 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 ANGEL2Q5VTE6 544 aaKnown RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 CDH24Q86UP0 819 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 JMYQ8N9B5 988 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 ASB11Q8WXH4 323 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 ASIC4Q96FT7 647 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 HSPA12BQ96MM6 686 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 SLC6A18Q96N87 628 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 KIF2CQ99661 725 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 IFT57Q9NWB7 429 aa5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 ZNF214Q9UL59 606 aaPredicted RBP5.83□□□□□ -1.48
SDCBPP2-201ENST00000424643 RGS13O14921 159 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 JUNBP17275 347 aaPredicted RBP5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 GBP1P32455 592 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 CCNFP41002 786 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 ZP2Q05996 745 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 TDRD10Q5VZ19 366 aaKnown RBP5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 C16orf86Q6ZW13 317 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 TMEM192Q8IY95 271 aa5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 BAHD1Q8TBE0 780 aaPredicted RBP5.82□□□□□ -1.48
SDCBPP2-201ENST00000424643 CCDC74BQ96LY2 380 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms