RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CDKAL1Q5VV42 579 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 ELOA2Q8IYF1 753 aaPredicted RBP16.2■□□□□ 0.18
MSH5-206ENST00000423982 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 HNRNPLLQ8WVV9 542 aaKnown RBP16.2■□□□□ 0.18
MSH5-206ENST00000423982 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
MSH5-206ENST00000423982 PSD3Q9NYI0 1048 aa16.2■□□□□ 0.18
MSH5-206ENST00000423982 PPP1R3GB7ZBB8 358 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 ENC1O14682 589 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 PDE6BP35913 854 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 ARHGAP25P42331 645 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 TRIM22Q8IYM9 498 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 CRACR2BQ8N4Y2 399 aaPredicted RBP16.19■□□□□ 0.18
MSH5-206ENST00000423982 FOXP1Q9H334 677 aaPredicted RBP16.19■□□□□ 0.18
MSH5-206ENST00000423982 HDAC6Q9UBN7 1215 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
MSH5-206ENST00000423982 UFL1O94874 794 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
MSH5-206ENST00000423982 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CHP1Q99653 195 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 TAB2Q9NYJ8 693 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 H0YIN7 160 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 C6orf229H3BNL8 230 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 TNNT3P45378 269 aaPredicted RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 WTAPQ15007 396 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 AKNAD1Q5T1N1 836 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 LEKR1Q6ZMV7 388 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 HINFPQ9BQA5 517 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CTAGE15A4D2H0 777 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CTAGE8P0CG41 777 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 KRT31Q15323 416 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CTAGE6Q86UF2 777 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CTAGE4Q8IX94 777 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 NAPGQ99747 312 aaPredicted RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 TSPYL1Q9H0U9 437 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 CWC15Q9P013 229 aaKnown RBP16.18■□□□□ 0.18
MSH5-206ENST00000423982 ABCF2Q9UG63 623 aa16.18■□□□□ 0.18
MSH5-206ENST00000423982 N4BP3O15049 544 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 ZMYND10O75800 440 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 NPR1P16066 1061 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 ZNF174Q15697 407 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 SPATA5Q8NB90 893 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 RIN2Q8WYP3 895 aaPredicted RBP16.17■□□□□ 0.18
MSH5-206ENST00000423982 WASF1Q92558 559 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 FAM84BQ96KN1 310 aaPredicted RBP16.17■□□□□ 0.18
MSH5-206ENST00000423982 ABHD10Q9NUJ1 306 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 GUCA1BQ9UMX6 200 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 CHD4Q14839 1912 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 ERLIN1O75477 346 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 DEXIO95424 95 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 UBE4AQ14139 1066 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.17■□□□□ 0.18
MSH5-206ENST00000423982 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
MSH5-206ENST00000423982 NAA15Q9BXJ9 866 aaKnown RBP16.17■□□□□ 0.18
MSH5-206ENST00000423982 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
MSH5-206ENST00000423982 TDO2P48775 406 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 AKAP17AQ02040 695 aaKnown RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 REXO2Q9Y3B8 237 aaKnown RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 KLRG2A4D1S0 409 aaPredicted RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 GSPT2Q8IYD1 628 aaKnown RBP16.16■□□□□ 0.18
MSH5-206ENST00000423982 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 FAM204AQ9H8W3 233 aa16.16■□□□□ 0.18
MSH5-206ENST00000423982 XDHP47989 1333 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 FILIP1LQ4L180 1135 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 CNGA4Q8IV77 575 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 MYO6Q9UM54 1294 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
MSH5-206ENST00000423982 BBOX1O75936 387 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
MSH5-206ENST00000423982 AMPD2Q01433 879 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 RRAGBQ5VZM2 374 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 LRRC31Q6UY01 552 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 IQUBQ8NA54 791 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
MSH5-206ENST00000423982 AATFQ9NY61 560 aaKnown RBP eCLIP16.15■□□□□ 0.18
MSH5-206ENST00000423982 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
MSH5-206ENST00000423982 KRT9P35527 623 aa16.14■□□□□ 0.17
MSH5-206ENST00000423982 CAPZA3Q96KX2 299 aa16.14■□□□□ 0.17
MSH5-206ENST00000423982 GGA1Q9UJY5 639 aa16.14■□□□□ 0.17
MSH5-206ENST00000423982 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms