RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ZNF213O14771 459 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 MCCP23508 829 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 MNX1P50219 401 aaPredicted RBP21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 PPP4R3BQ5MIZ7 849 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 MFSD6Q6ZSS7 791 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 ABRAQ8N0Z2 381 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 SLC38A10Q9HBR0 1119 aa21.08■□□□□ 0.97
SBDSP1-202ENST00000423945 TMEM232C9JQI7 657 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 ATP2A1O14983 1001 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 TFRCP02786 760 aaKnown RBP21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 CYP2C19P33261 490 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 DPP9Q86TI2 863 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 TRPV1Q8NER1 839 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 PCDH10Q9P2E7 1040 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 ALPK3Q96L96 1907 aa21.07■□□□□ 0.96
SBDSP1-202ENST00000423945 RAD50Q92878 1312 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 FCER1AP12319 257 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 SLC1A4P43007 532 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 OLFML2BQ68BL8 750 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 LHX8Q68G74 356 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 KCTD1Q719H9 257 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 DIS3LQ8TF46 1054 aaKnown RBP21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 TEX13BQ9BXU2 312 aa21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 RAVER2Q9HCJ3 691 aaKnown RBP21.06■□□□□ 0.96
SBDSP1-202ENST00000423945 SMCHD1A6NHR9 2005 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 PLA2G6O60733 806 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 PTH1RQ03431 593 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 MFSD14CQ5VZR4 134 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 MAML3Q96JK9 1138 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 MMP19Q99542 508 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 RNF41Q9H4P4 317 aaPredicted RBP21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 OGDHLQ9ULD0 1010 aa21.05■□□□□ 0.96
SBDSP1-202ENST00000423945 ZNF536O15090 1300 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 ZBED4O75132 1171 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 PGK2P07205 417 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 TOP1P11387 765 aaKnown RBP21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 CYBAP13498 195 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 CAPN2P17655 700 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 COPB2P35606 906 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 STAT2P52630 851 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 ZNF792Q3KQV3 632 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 ZKSCAN3Q9BRR0 538 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 MTMR7Q9Y216 660 aa21.04■□□□□ 0.96
SBDSP1-202ENST00000423945 SGSM2O43147 1006 aa21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 CENPQQ7L2Z9 268 aaPredicted RBP21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 FAM160B2Q86V87 743 aa21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 ESR2Q92731 530 aa21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 PAWRQ96IZ0 340 aaKnown RBP21.03■□□□□ 0.96
SBDSP1-202ENST00000423945 B4E1Z4 1266 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 KDM4AO75164 1064 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 OAZ1P54368 228 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 SNAP25P60880 206 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 KCTD2Q14681 263 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 IMMTQ16891 758 aaKnown RBP21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 ANKLE1Q8NAG6 615 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 CHURC1Q8WUH1 139 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 DCAF4Q8WV16 495 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 TTC14Q96N46 770 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 PRR12Q9ULL5 1215 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 CEP290O15078 2479 aa21.02■□□□□ 0.96
SBDSP1-202ENST00000423945 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
SBDSP1-202ENST00000423945 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
SBDSP1-202ENST00000423945 AGBL1Q96MI9 1066 aa21.01■□□□□ 0.95
SBDSP1-202ENST00000423945 TAF6LQ9Y6J9 622 aa21.01■□□□□ 0.95
SBDSP1-202ENST00000423945 DNAJC25-GNG10A0A024R161 153 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 SNHG28P0DPA3 235 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 FDX1P10109 184 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 PDHBP11177 359 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 CCDC96Q2M329 555 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 PRAMEF19Q5SWL8 479 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 BTNL9Q6UXG8 535 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 SLC5A4Q9NY91 659 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 ZSWIM5Q9P217 1185 aa21■□□□□ 0.95
SBDSP1-202ENST00000423945 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
SBDSP1-202ENST00000423945 FRMPD2Q68DX3 1309 aaPredicted RBP21■□□□□ 0.95
SBDSP1-202ENST00000423945 CYP21A2P08686 494 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 TAL1P17542 331 aaPredicted RBP20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 SLC16A2P36021 539 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 IKQ13123 557 aaPredicted RBP20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 ANKS1AQ92625 1134 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 FGD4Q96M96 766 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 DDX20Q9UHI6 824 aaKnown RBP20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 CTDP1Q9Y5B0 961 aaPredicted RBP20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 MCM3APO60318 1980 aa20.99■□□□□ 0.95
SBDSP1-202ENST00000423945 LCTP09848 1927 aa20.98■□□□□ 0.95
SBDSP1-202ENST00000423945 NT5C2P49902 561 aa20.98■□□□□ 0.95
SBDSP1-202ENST00000423945 CHST13Q8NET6 341 aa20.98■□□□□ 0.95
SBDSP1-202ENST00000423945 RANBP17Q9H2T7 1088 aaKnown RBP20.98■□□□□ 0.95
SBDSP1-202ENST00000423945 GPCPD1Q9NPB8 672 aa20.98■□□□□ 0.95
SBDSP1-202ENST00000423945 CNGA1P29973 690 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms