RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 SYNGAP1Q96PV0 1343 aa20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 UNC80Q8N2C7 3258 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 MYH4Q9Y623 1939 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 DNAJC25-GNG10A0A024R161 153 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 GSG1L2A8MUP6 293 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 RAG1P15918 1043 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 ECHDC1Q9NTX5 307 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 RIPK3Q9Y572 518 aa20.18■□□□□ 0.82
UPF3AP3-201ENST00000420996 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 ATP2A1O14983 1001 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 PQBP1O60828 265 aaKnown RBP20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 SNAI1O95863 264 aaPredicted RBP20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 NDUFB10O96000 172 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 ANKRD33Q7Z3H0 272 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 KBTBD3Q8NAB2 608 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 NUP133Q8WUM0 1156 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 LENG1Q96BZ8 264 aaPredicted RBP20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 TOX2Q96NM4 488 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 TTYH1Q9H313 450 aaPredicted RBP20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 TMEM39AQ9NV64 488 aa20.17■□□□□ 0.82
UPF3AP3-201ENST00000420996 MOXD2PA6NHM9 499 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 ZBED4O75132 1171 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 ACLYP53396 1101 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 EPHB4P54760 987 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 ZNF467Q7Z7K2 595 aaPredicted RBP20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 KLHDC9Q8NEP7 349 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 MAFAQ8NHW3 353 aaPredicted RBP20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 APPBP2Q92624 585 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 STARD7Q9NQZ5 370 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 SYNRGQ9UMZ2 1314 aa20.16■□□□□ 0.82
UPF3AP3-201ENST00000420996 TMEM265A0A087WTH1 108 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 DCDC2CA8MYV0 355 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 DUSP11O75319 330 aaKnown RBP20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 FPGSQ05932 587 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 FAAP100Q0VG06 881 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 CPXCR1Q8N123 301 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 MYLIPQ8WY64 445 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 MKL1Q969V6 931 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
UPF3AP3-201ENST00000420996 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 KCNA10Q16322 511 aa20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 CCSAPQ6IQ19 270 aaPredicted RBP20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 ZNF287Q9HBT7 754 aa20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 ZHX1Q9UKY1 873 aaPredicted RBP20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 SYNPO2Q9UMS6 1093 aa20.14■□□□□ 0.81
UPF3AP3-201ENST00000420996 ELP1O95163 1332 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 ZFYP08048 801 aaPredicted RBP20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 GNAT2P19087 354 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 ACVR2BQ13705 512 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 KIFC2Q96AC6 838 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 ABHD16BQ9H3Z7 469 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 SLC38A10Q9HBR0 1119 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 RAVER2Q9HCJ3 691 aaKnown RBP20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 MTMR4Q9NYA4 1195 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 FBXO40Q9UH90 709 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 FEM1BQ9UK73 627 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 MCM3APO60318 1980 aa20.13■□□□□ 0.81
UPF3AP3-201ENST00000420996 GPAA1O43292 621 aa20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 PCSK9Q8NBP7 692 aaKnown RBP20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 CHST13Q8NET6 341 aa20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 CEP95Q96GE4 821 aa20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 EPB41L4AQ9HCS5 686 aaPredicted RBP20.12■□□□□ 0.81
UPF3AP3-201ENST00000420996 MROH7Q68CQ1 1323 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 TTLL1O95922 423 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 TIMP1P01033 207 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 FOSL2P15408 326 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 TDO2P48775 406 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 OAZ1P54368 228 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 GMCL1P1Q8NEA9 526 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 FGD4Q96M96 766 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 GLT1D1Q96MS3 346 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 TBX21Q9UL17 535 aa20.11■□□□□ 0.81
UPF3AP3-201ENST00000420996 MYADML2A6NDP7 307 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 PRDM1O75626 825 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 APPP05067 770 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 ASGR1P07306 291 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms