RNA–Protein interactions for RNA: ENST00000419225.1

AC008060.3-201, humanhuman

TSL 4 BASIC

Gene AC008060.3, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.3-201ENST00000419225 STAT3P40763 770 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 STAT2P52630 851 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 CHURC1Q8WUH1 139 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 OGDHLQ9ULD0 1010 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 CEP290O15078 2479 aa11.09□□□□□ -0.63
AC008060.3-201ENST00000419225 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 RANBP6O60518 1105 aaKnown RBP11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 PEX10O60683 326 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 ZBED4O75132 1171 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 MYCP01106 439 aaPredicted RBP11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 BMP3P12645 472 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 PLS1Q14651 629 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 KCTD2Q14681 263 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 MFSD6Q6ZSS7 791 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 DPP9Q86TI2 863 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 DCAF4Q8WV16 495 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 SLC38A10Q9HBR0 1119 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 FBXO28Q9NVF7 368 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 STX8Q9UNK0 236 aa11.08□□□□□ -0.64
AC008060.3-201ENST00000419225 LCTP09848 1927 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 ZNF213O14771 459 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 RAD21O60216 631 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 TFRCP02786 760 aaKnown RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 PDE4AP27815 886 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 TKFCQ3LXA3 575 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 FAM47AQ5JRC9 791 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CWC27Q6UX04 472 aaKnown RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 NECAB2Q7Z6G3 386 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 ESR2Q92731 530 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
AC008060.3-201ENST00000419225 CYBAP13498 195 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 GSPT1P15170 499 aaKnown RBP11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 SLC1A4P43007 532 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 CCL14Q16627 93 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 IQCA1Q86XH1 822 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 MAML3Q96JK9 1138 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 MMP19Q99542 508 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
AC008060.3-201ENST00000419225 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 SEPT4O43236 478 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 TRIM32Q13049 653 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 ZNF792Q3KQV3 632 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 TBC1D10CQ8IV04 446 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 KRT23Q9C075 422 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 MAF1Q9H063 256 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 TOMM22Q9NS69 142 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 PFASO15067 1338 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
AC008060.3-201ENST00000419225 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 TMEM232C9JQI7 657 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 COBLO75128 1261 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 COL6A1P12109 1028 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 LHX8Q68G74 356 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 TINF2Q9BSI4 451 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 TACC3Q9Y6A5 838 aa11.04□□□□□ -0.64
AC008060.3-201ENST00000419225 DNM1LO00429 736 aa11.03□□□□□ -0.64
AC008060.3-201ENST00000419225 MCCP23508 829 aa11.03□□□□□ -0.64
AC008060.3-201ENST00000419225 CHMLP26374 656 aa11.03□□□□□ -0.64
AC008060.3-201ENST00000419225 CCND3P30281 292 aaPredicted RBP11.03□□□□□ -0.64
AC008060.3-201ENST00000419225 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
AC008060.3-201ENST00000419225 HAND2P61296 217 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms