RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 CCDC174Q6PII3 467 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 TMEM57Q8N5G2 664 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 FAM184BQ9ULE4 1060 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 MROH7Q68CQ1 1323 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 DUSP11O75319 330 aaKnown RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 ASGR1P07306 291 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 BMP1P13497 986 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 CST5P28325 142 aaPredicted RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 HOXD11P31277 338 aaPredicted RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 PSRC1Q6PGN9 363 aaPredicted RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 FAM126BQ8IXS8 530 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 TMEM199Q8N511 208 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 ZHX1Q9UKY1 873 aaPredicted RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 PPP1R9AQ9ULJ8 1098 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 YBX2Q9Y2T7 364 aaKnown RBP16.63■□□□□ 0.25
SSB-204ENST00000417292 GBF1Q92538 1859 aa16.63■□□□□ 0.25
SSB-204ENST00000417292 TCF20Q9UGU0 1960 aaKnown RBP16.62■□□□□ 0.25
SSB-204ENST00000417292 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 ARVCFO00192 962 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 EEF2P13639 858 aaKnown RBP16.62■□□□□ 0.25
SSB-204ENST00000417292 RAB30Q15771 203 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 MAMDC4Q6UXC1 1216 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
SSB-204ENST00000417292 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 MYH8P13535 1937 aa16.62■□□□□ 0.25
SSB-204ENST00000417292 DNAJC25-GNG10A0A024R161 153 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 C6orf222P0C671 652 aaPredicted RBP16.61■□□□□ 0.25
SSB-204ENST00000417292 CYP2C18P33260 490 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 TFF2Q03403 129 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 SLC28A3Q9HAS3 691 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 ZNF532Q9HCE3 1301 aa16.61■□□□□ 0.25
SSB-204ENST00000417292 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
SSB-204ENST00000417292 APBB1O00213 710 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 CTAGE5O15320 804 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 PRKAB2O43741 272 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 CD4P01730 458 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 COPB2P35606 906 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 AACSQ86V21 672 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 PCSK9Q8NBP7 692 aaKnown RBP16.6■□□□□ 0.25
SSB-204ENST00000417292 VTI1AQ96AJ9 217 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 C1QTNF1Q9BXJ1 281 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 UPF3AQ9H1J1 476 aaKnown RBP16.6■□□□□ 0.25
SSB-204ENST00000417292 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
SSB-204ENST00000417292 CDK8P49336 464 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 GJA9P57773 515 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 ACVR2BQ13705 512 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
SSB-204ENST00000417292 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 GNASQ5JWF2 1037 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 FGD4Q96M96 766 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
SSB-204ENST00000417292 FGBP02675 491 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 MYOGP15173 224 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 KCNQ1P51787 676 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 RABGGTBP53611 331 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 CCDC144BQ3MJ40 725 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.24
SSB-204ENST00000417292 OTOP2Q7RTS6 562 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
SSB-204ENST00000417292 TEX13BQ9BXU2 312 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
SSB-204ENST00000417292 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
SSB-204ENST00000417292 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.24
SSB-204ENST00000417292 MCM3APO60318 1980 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
SSB-204ENST00000417292 RAD21O60216 631 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 C12orf60Q5U649 245 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 C16orf86Q6ZW13 317 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
SSB-204ENST00000417292 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSB-204ENST00000417292 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
SSB-204ENST00000417292 SPC25Q9HBM1 224 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
SSB-204ENST00000417292 GOLIM4O00461 696 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 BEX3Q00994 111 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 PPP2R2DQ66LE6 453 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 LRFN3Q9BTN0 628 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 KATNBL1Q9H079 304 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms