RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 LIN37Q96GY3 246 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 FAM84AQ96KN4 292 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 PHAXQ9H814 394 aaKnown RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 CWC22Q9HCG8 908 aaKnown RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 TP53P04637 393 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 CTSKP43235 329 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 MESP2Q0VG99 397 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 GNL2Q13823 731 aaKnown RBP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 MLANAQ16655 118 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 NOL9Q5SY16 702 aaKnown RBP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 MPZL3Q6UWV2 235 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 WAPLQ7Z5K2 1190 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 BHLHE22Q8NFJ8 381 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 TNFRSF10DQ9UBN6 386 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZMYM5Q9UJ78 669 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 MINPP1Q9UNW1 487 aa5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 DIS3Q9Y2L1 958 aaKnown RBP5.93□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZNF205O95201 554 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 NOP2P46087 812 aaKnown RBP5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZNF445P59923 1031 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 DCAF15Q66K64 600 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 MAP6Q96JE9 813 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 DSCC1Q9BVC3 393 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 C19orf44Q9H6X5 657 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 PODXL2Q9NZ53 605 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZNF451Q9Y4E5 1061 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 FHOD1Q9Y613 1164 aa5.92□□□□□ -1.46
HMGB3P23-201ENST00000414981 NOTOA8MTQ0 251 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 NRDCO43847 1150 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 TRHRP34981 398 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 RBM25P49756 843 aaKnown RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 TDRD10Q5VZ19 366 aaKnown RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 CWF19L1Q69YN2 538 aaKnown RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 PRR23BQ6ZRT6 265 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 SHISA4Q96DD7 197 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 CAPN10Q9HC96 672 aa5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 YBX2Q9Y2T7 364 aaKnown RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 SF3B6Q9Y3B4 125 aaKnown RBP5.91□□□□□ -1.46
HMGB3P23-201ENST00000414981 E9PSI1 815 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 MEIS1O00470 390 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 C8AP07357 584 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 ITGA4P13612 1032 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 SLC14A2Q15849 920 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 PPP2R5EQ16537 467 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 TIGD5Q53EQ6 642 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZNF648Q5T619 568 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 IRF2BP1Q8IU81 584 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 HHIPL1Q96JK4 782 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 FCRL2Q96LA5 508 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 SLC38A3Q99624 504 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 RNF32Q9H0A6 362 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 CRTAC1Q9NQ79 661 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 IGSF5Q9NSI5 407 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 WHRNQ9P202 907 aa5.9□□□□□ -1.46
HMGB3P23-201ENST00000414981 FADS2P1A8MWK0 482 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 CBFA2T2O43439 604 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 PSPNO60542 156 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 FKTNO75072 461 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 HEATR6Q6AI08 1181 aaKnown RBP5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 ZPBP2Q6X784 338 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 FIBCD1Q8N539 461 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 SLC43A3Q8NBI5 491 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 BRF1Q92994 677 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 RCC1LQ96I51 464 aaKnown RBP5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 HAUS7Q99871 368 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 SLC12A9Q9BXP2 914 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 GPR160Q9UJ42 338 aa5.89□□□□□ -1.47
HMGB3P23-201ENST00000414981 A0A1W2PQ45 241 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 A0A1W2PQY0 241 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 WTIPA6NIX2 430 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 PPM1BO75688 479 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 RTP1P59025 263 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 POU4F1Q01851 419 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 RTP2Q5QGT7 225 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 GALNT18Q6P9A2 607 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 CRTC3Q6UUV7 619 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 CEP128Q6ZU80 1094 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 FAM169BQ8N8A8 192 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 TMEM52Q8NDY8 209 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 KLHL6Q8WZ60 621 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 CDADC1Q9BWV3 514 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 GBP3Q9H0R5 595 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 NSUN3Q9H649 340 aaKnown RBP5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 PCDHB10Q9UN67 800 aa5.88□□□□□ -1.47
HMGB3P23-201ENST00000414981 H0Y8X5 98 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 SSBP05455 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 GSTM1P09488 218 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms