RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 WNT8AQ9H1J5 351 aa19.27■□□□□ 0.68
CPNE1-208ENST00000414711 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
CPNE1-208ENST00000414711 SSTR3P32745 418 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-208ENST00000414711 GNASQ5JWF2 1037 aa19.26■□□□□ 0.67
CPNE1-208ENST00000414711 TTC6Q86TZ1 520 aa19.26■□□□□ 0.67
CPNE1-208ENST00000414711 FAM178BQ8IXR5 827 aa19.26■□□□□ 0.67
CPNE1-208ENST00000414711 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
CPNE1-208ENST00000414711 NOC4LQ9BVI4 516 aaKnown RBP19.26■□□□□ 0.67
CPNE1-208ENST00000414711 COL4A4P53420 1690 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-208ENST00000414711 PARP14Q460N5 1801 aa19.25■□□□□ 0.67
CPNE1-208ENST00000414711 ADCY6O43306 1168 aa19.25■□□□□ 0.67
CPNE1-208ENST00000414711 SNAI1O95863 264 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-208ENST00000414711 GRB10Q13322 594 aa19.25■□□□□ 0.67
CPNE1-208ENST00000414711 RIOX2Q8IUF8 465 aa19.25■□□□□ 0.67
CPNE1-208ENST00000414711 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
CPNE1-208ENST00000414711 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-208ENST00000414711 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
CPNE1-208ENST00000414711 GJA9P57773 515 aa19.24■□□□□ 0.67
CPNE1-208ENST00000414711 TAP1Q03518 808 aa19.24■□□□□ 0.67
CPNE1-208ENST00000414711 TTLL4Q14679 1199 aa19.24■□□□□ 0.67
CPNE1-208ENST00000414711 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
CPNE1-208ENST00000414711 ARHGEF15O94989 841 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 MIGA1Q8NAN2 632 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 SLC43A3Q8NBI5 491 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 ZNF318Q5VUA4 2279 aa19.23■□□□□ 0.67
CPNE1-208ENST00000414711 CYP2E1P05181 493 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-208ENST00000414711 CYP7A1P22680 504 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 COPB2P35606 906 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 PLCD1P51178 756 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 MAMDC4Q6UXC1 1216 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 CERS3Q8IU89 383 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 SCLYQ96I15 445 aa19.22■□□□□ 0.67
CPNE1-208ENST00000414711 UBE2ZQ9H832 354 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-208ENST00000414711 SRGAP3O43295 1099 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 DCXO43602 365 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 ST18O60284 1047 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 LPXNO60711 386 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 PFKMP08237 780 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 STAT3P40763 770 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 ACVR2BQ13705 512 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 CCDC144BQ3MJ40 725 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 SLC9A7Q96T83 725 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
CPNE1-208ENST00000414711 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
CPNE1-208ENST00000414711 ZDBF2Q9HCK1 2354 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
CPNE1-208ENST00000414711 CTAGE5O15320 804 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 IGSF3O75054 1194 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 LEXMQ3ZCV2 418 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 PHOX2BQ99453 314 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
CPNE1-208ENST00000414711 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
CPNE1-208ENST00000414711 ZNF214Q9UL59 606 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-208ENST00000414711 B4GALT4O60513 344 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 IL9P15248 144 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 BEX3Q00994 111 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 GABPAQ06546 454 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 TMEM179Q6ZVK1 233 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 AGBL1Q96MI9 1066 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 ARHGEF10LQ9HCE6 1279 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
CPNE1-208ENST00000414711 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-208ENST00000414711 VWA5AO00534 786 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 CABYRO75952 493 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 NKX3-2P78367 333 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 FOXK2Q01167 660 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 SPRED2Q7Z698 418 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-208ENST00000414711 CLEC10AQ8IUN9 316 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 GDPD5Q8WTR4 605 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 MEIS3Q99687 375 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 ABHD16BQ9H3Z7 469 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 TMX2Q9Y320 296 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 ZNF536O15090 1300 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 NAV1Q8NEY1 1877 aa19.18■□□□□ 0.66
CPNE1-208ENST00000414711 DNAJC25-GNG10A0A024R161 153 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-208ENST00000414711 ACTN1P12814 892 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 KCNA5P22460 613 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 ICA1Q05084 483 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 HFE2Q6ZVN8 426 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 DEFB128Q7Z7B8 93 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 HERC6Q8IVU3 1022 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-208ENST00000414711 PHOSPHO2Q8TCD6 241 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 LMCD1Q9NZU5 365 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 GRIN2DO15399 1336 aa19.17■□□□□ 0.66
CPNE1-208ENST00000414711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-208ENST00000414711 KIF28PB7ZC32 967 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 ZAP70P43403 619 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 CCDC158Q5M9N0 1113 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 PTCRAQ6ISU1 281 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms