RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CCDC85BQ15834 202 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CLEC16AQ2KHT3 1053 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ABRAXAS1Q6UWZ7 409 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 DZIP3Q86Y13 1208 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 GATAD2AQ86YP4 633 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SLF2Q8IX21 1173 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RNF34Q969K3 372 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RPAP3Q9H6T3 665 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PPP1R14DQ9NXH3 145 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ERAP1Q9NZ08 941 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 STK26Q9P289 416 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ZNF229Q9UJW7 825 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 HOXA7P31268 230 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 GUCY1A3Q02108 690 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 HS1BP3Q53T59 392 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC185Q8N715 623 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 IL27Q8NEV9 243 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 RNASE11Q8TAA1 199 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 NOX5Q96PH1 765 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 RSL24D1Q9UHA3 163 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC162PA2VCL2 907 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 SPDYE2BA6NHP3 402 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 GOLGA8JA6NMD2 632 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KRT86O43790 486 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 AKR1B10O60218 316 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TSPAN9O75954 239 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 SPDYE6P0CI01 402 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 HSD3B1P14060 373 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 MCM4P33991 863 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KRT2P35908 639 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 PDE6CP51160 858 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 DEPDC1Q5TB30 811 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 MPNDQ8N594 471 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 RTEL1Q9NZ71 1219 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ZBTB1Q9Y2K1 713 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 DIS3Q9Y2L1 958 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 EID1Q9Y6B2 187 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CLIP1P30622 1438 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 GUCA1CO95843 209 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 PAMP19021 973 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CYLC2Q14093 348 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 VWA3BQ502W6 1294 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM68Q6AZZ1 485 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 UBE2Q2Q8WVN8 375 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 BTN2A2Q8WVV5 523 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 SPATA17Q96L03 361 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 PCDH18Q9HCL0 1135 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ATG3Q9NT62 314 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KLHL14Q9P2G3 628 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KLHL18O94889 574 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 BAG2O95816 211 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KRT15P19012 456 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 BPIFB4P59827 614 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 RNF217Q8TC41 542 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 POMGNT1Q8WZA1 660 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 GTF3C6Q969F1 213 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 UPF3AQ9H1J1 476 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 RBSNQ9H1K0 784 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ZC3H7BQ9UGR2 993 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TBC1D8O95759 1140 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 OATP04181 439 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 SCG2P13521 617 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 LIN9Q5TKA1 542 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TIGD7Q6NT04 549 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 FGD2Q7Z6J4 655 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TAF8Q7Z7C8 310 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ZSCAN29Q8IWY8 852 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CATSPER1Q8NEC5 780 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 LRRC39Q96DD0 335 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CRNKL1Q9BZJ0 848 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 NRDE2Q9H7Z3 1164 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 A0A087WUV0 522 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 KRT37O76014 449 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 HEXIM1O94992 359 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 AK2P54819 239 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 NXNQ6DKJ4 435 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 PNMA8AQ86V59 439 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-202ENST00000411767 TDRPQ86YL5 185 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 P3H3Q8IVL6 736 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ATP8B4Q8TF62 1192 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 OTULINQ96BN8 352 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 HDAC11Q96DB2 347 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 VIPAS39Q9H9C1 493 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 ITGB1BP2Q9UKP3 347 aa5.01□□□□□ -1.61
PTPN13-202ENST00000411767 NDUFAB1O14561 156 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 STX10O60499 249 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM13O60858 407 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 MYCP01106 439 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 RALBP11234 206 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM27P14373 513 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ECHS1P30084 290 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 TRIP4Q15650 581 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 MSL3Q8N5Y2 521 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 TTC13Q8NBP0 860 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 KATNAL1Q9BW62 490 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 C22orf23Q9BZE7 217 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 NACA2Q9H009 215 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 VEZTQ9HBM0 779 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms