RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MEIS1O00470 390 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 KCNH1O95259 989 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 GDF11O95390 407 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 FGFR1P11362 822 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 SRFP11831 508 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 PABPC1P11940 636 aaKnown RBP7.36□□□□□ -1.23
LSM5-206ENST00000409987 GYS2P54840 703 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 TCEA2Q15560 299 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 POMZP3Q6PJE2 187 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 FAM181AQ8N9Y4 354 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 SHKBP1Q8TBC3 707 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 PIWIL2Q8TC59 973 aaKnown RBP7.36□□□□□ -1.23
LSM5-206ENST00000409987 OSBP2Q969R2 916 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 ZDHHC15Q96MV8 337 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 CDC6Q99741 560 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 DHRS4Q9BTZ2 278 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 HDAC8Q9BY41 377 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
LSM5-206ENST00000409987 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
LSM5-206ENST00000409987 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 WDR64B1ANS9 1081 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 H0Y8X5 98 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 PRODHO43272 600 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 IGLV1-40P01703 118 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 NCLP19338 710 aaKnown RBP7.35□□□□□ -1.23
LSM5-206ENST00000409987 CTSKP43235 329 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 GRB10Q13322 594 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 DOC2BQ14184 412 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 NKPD1Q17RQ9 610 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 DUSP27Q5VZP5 1158 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 SYNPOQ8N3V7 929 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 CRACR2BQ8N4Y2 399 aaPredicted RBP7.35□□□□□ -1.23
LSM5-206ENST00000409987 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 GPR62Q9BZJ7 368 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
LSM5-206ENST00000409987 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
LSM5-206ENST00000409987 CCDC163A0A0D9SF12 145 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 FAM155AB1AL88 458 aaPredicted RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 VAMP4O75379 141 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 H2AFB2P0C5Z0 115 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 ITIH2P19823 946 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 FSTP19883 344 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 CBX2Q14781 532 aaPredicted RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 SF1Q15637 639 aaKnown RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 NSMFQ6X4W1 530 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 SCUBE1Q8IWY4 988 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 SPACA3Q8IXA5 215 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 TMEM151AQ8N4L1 468 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 OSBPL1AQ9BXW6 950 aa7.34□□□□□ -1.23
LSM5-206ENST00000409987 ASCC2Q9H1I8 757 aaPredicted RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 SLKQ9H2G2 1235 aaPredicted RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 SF3B6Q9Y3B4 125 aaKnown RBP7.34□□□□□ -1.23
LSM5-206ENST00000409987 GFRA1P56159 465 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 CYP4F3Q08477 520 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 DALRD3Q5D0E6 543 aaKnown RBP7.33□□□□□ -1.24
LSM5-206ENST00000409987 NKAPLQ5M9Q1 402 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 CRTC3Q6UUV7 619 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 DAGLBQ8NCG7 672 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 ENOX1Q8TC92 643 aaKnown RBP7.33□□□□□ -1.24
LSM5-206ENST00000409987 GPATCH3Q96I76 525 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 MCMBPQ9BTE3 642 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 METTL22Q9BUU2 404 aaPredicted RBP7.33□□□□□ -1.24
LSM5-206ENST00000409987 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 NKX2-4Q9H2Z4 354 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 PLAGL2Q9UPG8 496 aa7.33□□□□□ -1.24
LSM5-206ENST00000409987 GPR55Q9Y2T6 319 aaPredicted RBP7.33□□□□□ -1.24
LSM5-206ENST00000409987 WASH4PA8MWX3 477 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 GSC2O15499 205 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 DLX3O60479 287 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 PROCP04070 461 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 GSNP06396 782 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 CEACAM5P06731 702 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
LSM5-206ENST00000409987 AMPD2Q01433 879 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
LSM5-206ENST00000409987 CLEC16AQ2KHT3 1053 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 DPY19L1Q2PZI1 675 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 RNF187Q5TA31 235 aaPredicted RBP7.32□□□□□ -1.24
LSM5-206ENST00000409987 CDKAL1Q5VV42 579 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
LSM5-206ENST00000409987 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 LRRC4CQ9HCJ2 640 aa7.32□□□□□ -1.24
LSM5-206ENST00000409987 PLD2O14939 933 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 RAPGEF3O95398 923 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
LSM5-206ENST00000409987 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
LSM5-206ENST00000409987 HOXC12P31275 282 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 PABPC4Q13310 644 aaKnown RBP eCLIP7.31□□□□□ -1.247e-10■□□□□ 11.1
LSM5-206ENST00000409987 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms