RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TLR3O15455 904 aaKnown RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 LRRFIP1Q32MZ4 808 aaKnown RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 ADGRF1Q5T601 910 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 TCERG1LQ5VWI1 586 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 REXO1Q8N1G1 1221 aaKnown RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 ZNF296Q8WUU4 475 aaPredicted RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 FCRL2Q96LA5 508 aaPredicted RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 NT5C1AQ9BXI3 368 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 CNNM2Q9H8M5 875 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 BRMS1Q9HCU9 246 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
CLK1-203ENST00000409769 SIGLEC6O43699 453 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 CLEC3AO75596 197 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 USP2O75604 605 aaPredicted RBP7.11□□□□□ -1.27
CLK1-203ENST00000409769 CTSWP56202 376 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 PRR13Q9NZ81 148 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 KCTD3Q9Y597 815 aa7.11□□□□□ -1.27
CLK1-203ENST00000409769 NOTOA8MTQ0 251 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 PNLIPP16233 465 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 HDLBPQ00341 1268 aaKnown RBP7.1□□□□□ -1.27
CLK1-203ENST00000409769 TMEM62Q0P6H9 643 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 NLRC3Q7RTR2 1065 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 PARD6AQ9NPB6 346 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 SIRT5Q9NXA8 310 aa7.1□□□□□ -1.27
CLK1-203ENST00000409769 TMEM82A0PJX8 343 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 SYPP08247 313 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 ARL4AP40617 200 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 ZNF165P49910 485 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
CLK1-203ENST00000409769 BBS9Q3SYG4 887 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 TMC3Q7Z5M5 1100 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 ATG4CQ96DT6 458 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 HHIPL1Q96JK4 782 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 SIGLEC10Q96LC7 697 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 IRAK3Q9Y616 596 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 CECR2Q9BXF3 1484 aa7.09□□□□□ -1.27
CLK1-203ENST00000409769 WTIPA6NIX2 430 aaPredicted RBP7.08□□□□□ -1.28
CLK1-203ENST00000409769 MEIS3P2A8K0S8 358 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 PRAMEF1O95521 474 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 RTP1P59025 263 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 RACK1P63244 317 aaKnown RBP7.08□□□□□ -1.28
CLK1-203ENST00000409769 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 KIAA0825Q8IV33 1275 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 SLITRK4Q8IW52 837 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 CHST7Q9NS84 486 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 IGSF5Q9NSI5 407 aa7.08□□□□□ -1.28
CLK1-203ENST00000409769 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
CLK1-203ENST00000409769 TNFRSF10CO14798 259 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 HOXA5P20719 270 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 BMP8BP34820 402 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
CLK1-203ENST00000409769 ERVFRD-1P60508 538 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 YBX1P67809 324 aaKnown RBP7.07□□□□□ -1.28
CLK1-203ENST00000409769 APOBRQ0VD83 1088 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 NT5DC4Q86YG4 428 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 PRDM14Q9GZV8 571 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 ZCCHC4Q9H5U6 513 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 TAF6LQ9Y6J9 622 aa7.07□□□□□ -1.28
CLK1-203ENST00000409769 SMARCA4P51532 1647 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 N4BP3O15049 544 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 MPOP05164 745 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
CLK1-203ENST00000409769 TCF3P15923 654 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 SNW1Q13573 536 aaKnown RBP7.06□□□□□ -1.28
CLK1-203ENST00000409769 EAF1Q96JC9 268 aaPredicted RBP7.06□□□□□ -1.28
CLK1-203ENST00000409769 SGPP1Q9BX95 441 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 KRTAP4-2Q9BYR5 136 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 TGIF2Q9GZN2 237 aa7.06□□□□□ -1.28
CLK1-203ENST00000409769 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
CLK1-203ENST00000409769 BAZ1AQ9NRL2 1556 aaPredicted RBP7.06□□□□□ -1.28
CLK1-203ENST00000409769 A0A1W2PQ45 241 aaPredicted RBP7.05□□□□□ -1.28
CLK1-203ENST00000409769 A0A1W2PQY0 241 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 FADS2P1A8MWK0 482 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 E9PSI1 815 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 FKTNO75072 461 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 BMP7P18075 431 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 POLR2BP30876 1174 aaKnown RBP7.05□□□□□ -1.28
CLK1-203ENST00000409769 MCM4P33991 863 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 CRKP46108 304 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 GALK1P51570 392 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 SEZ6Q53EL9 994 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 GK5Q6ZS86 529 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 DHRS1Q96LJ7 313 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 KCNC2Q96PR1 638 aa7.05□□□□□ -1.28
CLK1-203ENST00000409769 MROH2BQ7Z745 1585 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 ZNF205O95201 554 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms