RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 NAP1L3Q99457 506 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 COL4A3BPQ9Y5P4 624 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 P4HA1P13674 534 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 PLA2G4DQ86XP0 818 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 CCDC117Q8IWD4 279 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 PAGR1Q9BTK6 254 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 CTNND2Q9UQB3 1225 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 LRRIQ1Q96JM4 1722 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 DNA2P51530 1060 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 C17orf53Q8N3J3 647 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
PCDHA13-202ENST00000409494 EXOC3O60645 756 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 N4BP1O75113 896 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 BCRP11274 1271 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 TMOD1P28289 359 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 LIN9Q5TKA1 542 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 MTUS1Q9ULD2 1270 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 KCNQ4P56696 695 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 CLUL1Q15846 466 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 RIOK3O14730 519 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 FDX1P10109 184 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 LMAN1P49257 510 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 LCORLQ8N3X6 602 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 DEPTORQ8TB45 409 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 MTMR6Q9Y217 621 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 CNTNAP4Q9C0A0 1308 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 MYL1P05976 194 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 SMC1AQ14683 1233 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 MRPL44Q9H9J2 332 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
PCDHA13-202ENST00000409494 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 PRPF3O43395 683 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 DTNBO60941 627 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 TNFAIP3P21580 790 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 DDX25Q9UHL0 483 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 M0R2C6 588 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 RAD17O75943 681 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 TSNARE1Q96NA8 513 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 METTL14Q9HCE5 456 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 IKBKGQ9Y6K9 419 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 TESPA1A2RU30 521 aaPredicted RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 PPP2R5AQ15172 486 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 CEP128Q6ZU80 1094 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 CCDC155Q8N6L0 562 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 OGFRQ9NZT2 677 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 CLRN2A0PK11 232 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 GTPBP6O43824 516 aaPredicted RBP18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 PPP6R2O75170 966 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 PPP2R3AQ06190 1150 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 TPH2Q8IWU9 490 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 ERO1AQ96HE7 468 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
PCDHA13-202ENST00000409494 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 HSPA1LP34931 641 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 PRR16Q569H4 304 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 TMTC1Q8IUR5 882 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 IGSF22Q8N9C0 903 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 PXDNLA1KZ92 1463 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 STAT2P52630 851 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 SLC9C1Q4G0N8 1177 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 DCAF4Q8WV16 495 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 VWDEQ8N2E2 1590 aa18.64■□□□□ 0.57
PCDHA13-202ENST00000409494 RAPGEF1Q13905 1077 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 NFIXQ14938 502 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 INF2Q27J81 1249 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 STAG1Q8WVM7 1258 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 GOLGA1Q92805 767 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 CCDC51Q96ER9 411 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 PIH1D3Q9NQM4 214 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 GCNT3O95395 438 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 MYOCDQ8IZQ8 938 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 SH3GLB2Q9NR46 395 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 PABPN1LA6NDY0 278 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 CUL4AQ13619 759 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 CYP26C1Q6V0L0 522 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 NCAPG2Q86XI2 1143 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 JAKMIP2Q96AA8 810 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 C21orf2O43822 256 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 SREK1Q8WXA9 508 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 ADPGKQ9BRR6 497 aa18.63■□□□□ 0.57
PCDHA13-202ENST00000409494 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 MCAMP43121 646 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms