RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 COPB2P35606 906 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 PLA2G5P39877 138 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 TMEM199Q8N511 208 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 MSRAQ9UJ68 235 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 ZNF214Q9UL59 606 aaPredicted RBP20.14■□□□□ 0.81
CHMP3-203ENST00000409225 MYO9BQ13459 2157 aa20.14■□□□□ 0.81
CHMP3-203ENST00000409225 ELP1O95163 1332 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 CYP2D7A0A087X1C5 515 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 TCRBV5S4A2TA0A5A2 114 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 SMIM22K7EJ46 135 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 PRKAB2O43741 272 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 C6orf222P0C671 652 aaPredicted RBP20.13■□□□□ 0.81
CHMP3-203ENST00000409225 CDK8P49336 464 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 CDK7P50613 346 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 FAM83BQ5T0W9 1011 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 PSRC1Q6PGN9 363 aaPredicted RBP20.13■□□□□ 0.81
CHMP3-203ENST00000409225 REPS2Q8NFH8 660 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 FAM122AQ96E09 287 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 CCDC17Q96LX7 622 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
CHMP3-203ENST00000409225 NKX2-4Q9H2Z4 354 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 EXOC6BQ9Y2D4 811 aa20.13■□□□□ 0.81
CHMP3-203ENST00000409225 SYNGAP1Q96PV0 1343 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 GOLIM4O00461 696 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 DUSP11O75319 330 aaKnown RBP20.12■□□□□ 0.81
CHMP3-203ENST00000409225 ASGR1P07306 291 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 RAB30Q15771 203 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
CHMP3-203ENST00000409225 MSL3Q8N5Y2 521 aaKnown RBP20.12■□□□□ 0.81
CHMP3-203ENST00000409225 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 GOPCQ9HD26 462 aa20.12■□□□□ 0.81
CHMP3-203ENST00000409225 A0A0U1RQG5 324 aaPredicted RBP20.11■□□□□ 0.81
CHMP3-203ENST00000409225 CST5P28325 142 aaPredicted RBP20.11■□□□□ 0.81
CHMP3-203ENST00000409225 SLC4A3P48751 1232 aa20.11■□□□□ 0.81
CHMP3-203ENST00000409225 ITPRIPQ8IWB1 547 aa20.11■□□□□ 0.81
CHMP3-203ENST00000409225 PCSK9Q8NBP7 692 aaKnown RBP20.11■□□□□ 0.81
CHMP3-203ENST00000409225 IL1RAPL2Q9NP60 686 aa20.11■□□□□ 0.81
CHMP3-203ENST00000409225 ARVCFO00192 962 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 TLR3O15455 904 aaKnown RBP20.1■□□□□ 0.81
CHMP3-203ENST00000409225 ADCY6O43306 1168 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 CYP2C18P33260 490 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
CHMP3-203ENST00000409225 ERC1Q8IUD2 1116 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 KANSL2Q9H9L4 492 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
CHMP3-203ENST00000409225 CXXC1Q9P0U4 656 aaPredicted RBP20.1■□□□□ 0.81
CHMP3-203ENST00000409225 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 MBD4O95243 580 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 ACVR2BQ13705 512 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 SLFNL1Q499Z3 407 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 C12orf60Q5U649 245 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 MAMDC4Q6UXC1 1216 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 C16orf86Q6ZW13 317 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 FAM126BQ8IXS8 530 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
CHMP3-203ENST00000409225 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 HERVK_113Q902F9 699 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 NECAB3Q96P71 396 aaPredicted RBP20.09■□□□□ 0.81
CHMP3-203ENST00000409225 NUP88Q99567 741 aaPredicted RBP20.09■□□□□ 0.81
CHMP3-203ENST00000409225 TEX13BQ9BXU2 312 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 SLC28A3Q9HAS3 691 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 IL23AQ9NPF7 189 aa20.09■□□□□ 0.81
CHMP3-203ENST00000409225 YBX2Q9Y2T7 364 aaKnown RBP20.09■□□□□ 0.81
CHMP3-203ENST00000409225 BAZ2AQ9UIF9 1905 aaKnown RBP20.09■□□□□ 0.81
CHMP3-203ENST00000409225 USP17L12C9JPN9 530 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 USP17L21D6R901 530 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 GNASQ5JWF2 1037 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 CEP85Q6P2H3 762 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 SLF1Q9BQI6 1058 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
CHMP3-203ENST00000409225 MTIF3Q9H2K0 278 aaKnown RBP20.08■□□□□ 0.81
CHMP3-203ENST00000409225 ATP8A2Q9NTI2 1148 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.08■□□□□ 0.81
CHMP3-203ENST00000409225 RIPK3Q9Y572 518 aa20.08■□□□□ 0.81
CHMP3-203ENST00000409225 NCOR1O75376 2440 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 DNAJC25-GNG10A0A024R161 153 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 FGBP02675 491 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 GJA9P57773 515 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 CCDC144BQ3MJ40 725 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 BCL11AQ9H165 835 aa20.07■□□□□ 0.8
CHMP3-203ENST00000409225 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
CHMP3-203ENST00000409225 OTOP2Q7RTS6 562 aa20.06■□□□□ 0.8
CHMP3-203ENST00000409225 ZNF467Q7Z7K2 595 aaPredicted RBP20.06■□□□□ 0.8
CHMP3-203ENST00000409225 CPXCR1Q8N123 301 aa20.06■□□□□ 0.8
CHMP3-203ENST00000409225 RHPN1Q8TCX5 695 aa20.06■□□□□ 0.8
CHMP3-203ENST00000409225 GBF1Q92538 1859 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 TCF20Q9UGU0 1960 aaKnown RBP20.05■□□□□ 0.8
CHMP3-203ENST00000409225 BDP1A6H8Y1 2624 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 CD4P01730 458 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 ADD2P35612 726 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 RABGGTBP53611 331 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 BEX3Q00994 111 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHMP3-203ENST00000409225 ABHD16BQ9H3Z7 469 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 HIPK3Q9H422 1215 aa20.05■□□□□ 0.8
CHMP3-203ENST00000409225 CTDP1Q9Y5B0 961 aaPredicted RBP20.05■□□□□ 0.8
CHMP3-203ENST00000409225 UMODL1Q5DID0 1318 aa20.04■□□□□ 0.8
CHMP3-203ENST00000409225 RLBP1P12271 317 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms