RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.05■□□□□ 0.64
NUP50-203ENST00000407019 STAT6P42226 847 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 CDK8P49336 464 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 DTHD1Q6ZMT9 781 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 PPFIBP1Q86W92 1011 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 PANX2Q96RD6 677 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 EYA3Q99504 573 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 RWDD2AQ9UIY3 292 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
NUP50-203ENST00000407019 RPN1P04843 607 aaKnown RBP19.04■□□□□ 0.64
NUP50-203ENST00000407019 SERPINB2P05120 415 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 GYS1P13807 737 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 PBX1P40424 430 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 PAK1Q13153 545 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 ZNF658Q5TYW1 1059 aaPredicted RBP19.04■□□□□ 0.64
NUP50-203ENST00000407019 IGSF22Q8N9C0 903 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 NEDD1Q8NHV4 660 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 SPZ1Q9BXG8 430 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 DISC1Q9NRI5 854 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 FLT1P17948 1338 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 KLRF2D3W0D1 207 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 CBX1P83916 185 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 KARSQ15046 597 aaKnown RBP19.04■□□□□ 0.64
NUP50-203ENST00000407019 INF2Q27J81 1249 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 TOGARAM2Q6ZUX3 1019 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 SLF2Q8IX21 1173 aa19.04■□□□□ 0.64
NUP50-203ENST00000407019 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
NUP50-203ENST00000407019 CDK5RAP2Q96SN8 1893 aa19.03■□□□□ 0.64
NUP50-203ENST00000407019 SPDYE4A6NLX3 237 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 LAD1O00515 517 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 BBOX1O75936 387 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 PARP1P09874 1014 aaKnown RBP19.02■□□□□ 0.64
NUP50-203ENST00000407019 CDC25AP30304 524 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 SPAG1Q07617 926 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 RASSF8Q8NHQ8 419 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 CCDC12Q8WUD4 166 aaPredicted RBP19.02■□□□□ 0.64
NUP50-203ENST00000407019 FAM163AQ96GL9 167 aaPredicted RBP19.02■□□□□ 0.64
NUP50-203ENST00000407019 TMEM60Q9H2L4 133 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 PODXL2Q9NZ53 605 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 LIMA1Q9UHB6 759 aaKnown RBP19.02■□□□□ 0.64
NUP50-203ENST00000407019 ITIH6Q6UXX5 1313 aa19.02■□□□□ 0.64
NUP50-203ENST00000407019 RHBDL3P58872 404 aa19.02■□□□□ 0.63
NUP50-203ENST00000407019 RBL2Q08999 1139 aa19.02■□□□□ 0.63
NUP50-203ENST00000407019 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.63
NUP50-203ENST00000407019 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.63
NUP50-203ENST00000407019 NELFBQ8WX92 580 aa19.02■□□□□ 0.63
NUP50-203ENST00000407019 NAA15Q9BXJ9 866 aaKnown RBP19.02■□□□□ 0.63
NUP50-203ENST00000407019 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.63
NUP50-203ENST00000407019 GAKO14976 1311 aa19.02■□□□□ 0.63
NUP50-203ENST00000407019 PRPHP41219 470 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 NAPAP54920 295 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 KMT5BQ4FZB7 885 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 UBR3Q6ZT12 1888 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 TBC1D16Q8TBP0 767 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 ZMYND12Q9H0C1 365 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 FANCGO15287 622 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 URI1O94763 535 aaPredicted RBP19.01■□□□□ 0.63
NUP50-203ENST00000407019 UBA7P41226 1012 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 KRT31Q15323 416 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
NUP50-203ENST00000407019 RASGRP2Q7LDG7 609 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 KRT25Q7Z3Z0 450 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 LRRN4CLQ8ND94 238 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 ANKRD20A12PQ8NF67 263 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 CCSER1Q9C0I3 900 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 POLLQ9UGP5 575 aa19.01■□□□□ 0.63
NUP50-203ENST00000407019 PP2D1A8MPX8 630 aa19■□□□□ 0.63
NUP50-203ENST00000407019 MFAP3LO75121 409 aa19■□□□□ 0.63
NUP50-203ENST00000407019 COBLO75128 1261 aa19■□□□□ 0.63
NUP50-203ENST00000407019 GNG11P61952 73 aa19■□□□□ 0.63
NUP50-203ENST00000407019 NAALADL2Q58DX5 795 aa19■□□□□ 0.63
NUP50-203ENST00000407019 FBXO38Q6PIJ6 1188 aa19■□□□□ 0.63
NUP50-203ENST00000407019 RRP36Q96EU6 259 aaKnown RBP19■□□□□ 0.63
NUP50-203ENST00000407019 OGFRQ9NZT2 677 aa19■□□□□ 0.63
NUP50-203ENST00000407019 GDAQ9Y2T3 454 aa19■□□□□ 0.63
NUP50-203ENST00000407019 PARP3Q9Y6F1 533 aa19■□□□□ 0.63
NUP50-203ENST00000407019 SOWAHDA6NJG2 315 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 MYL1P05976 194 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CCDC175P0C221 793 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 HOXA10P31260 410 aaPredicted RBP18.99■□□□□ 0.63
NUP50-203ENST00000407019 CASQ1P31415 396 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CCT6AP40227 531 aaKnown RBP18.99■□□□□ 0.63
NUP50-203ENST00000407019 ERCC6LQ2NKX8 1250 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CNGA4Q8IV77 575 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CPLX3Q8WVH0 158 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CCDC51Q96ER9 411 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 DESI2Q9BSY9 194 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 C6orf50Q9HD87 102 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 LRRC10BA6NIK2 292 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 N4BP3O15049 544 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 TPM1P09493 284 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 PRCPP42785 496 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 KCNB1Q14721 858 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 NONOQ15233 471 aaKnown RBP eCLIP18.99■□□□□ 0.63
NUP50-203ENST00000407019 USP17L2Q6R6M4 530 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 SEPT12Q8IYM1 358 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms