RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 ZNF467Q7Z7K2 595 aaPredicted RBP23.17■■□□□ 1.3
HDAC11-205ENST00000404548 TTC41PQ6P2S7 1318 aa23.16■■□□□ 1.3
HDAC11-205ENST00000404548 MINDY4BA8MYZ0 360 aa23.16■■□□□ 1.3
HDAC11-205ENST00000404548 MYCNP04198 464 aaPredicted RBP23.16■■□□□ 1.3
HDAC11-205ENST00000404548 TDO2P48775 406 aa23.16■■□□□ 1.3
HDAC11-205ENST00000404548 SNRNP48Q6IEG0 339 aaKnown RBP23.16■■□□□ 1.3
HDAC11-205ENST00000404548 GMCL1P1Q8NEA9 526 aa23.16■■□□□ 1.3
HDAC11-205ENST00000404548 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
HDAC11-205ENST00000404548 TSEN34Q9BSV6 310 aaKnown RBP23.16■■□□□ 1.3
HDAC11-205ENST00000404548 PRDM5Q9NQX1 630 aaPredicted RBP23.16■■□□□ 1.3
HDAC11-205ENST00000404548 ADAMTS4O75173 837 aa23.15■■□□□ 1.3
HDAC11-205ENST00000404548 OAZ1P54368 228 aa23.15■■□□□ 1.3
HDAC11-205ENST00000404548 ZNF444Q8N0Y2 327 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-205ENST00000404548 FERMT2Q96AC1 680 aa23.15■■□□□ 1.3
HDAC11-205ENST00000404548 MTMR4Q9NYA4 1195 aa23.15■■□□□ 1.3
HDAC11-205ENST00000404548 TACC3Q9Y6A5 838 aa23.15■■□□□ 1.3
HDAC11-205ENST00000404548 TRIM43BA6NCK2 446 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.29
HDAC11-205ENST00000404548 ZBED4O75132 1171 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 TAL1P17542 331 aaPredicted RBP23.14■■□□□ 1.29
HDAC11-205ENST00000404548 TLE2Q04725 743 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 BADQ92934 168 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 TRIM43Q96BQ3 446 aaPredicted RBP23.14■■□□□ 1.29
HDAC11-205ENST00000404548 CEP95Q96GE4 821 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 SLC38A10Q9HBR0 1119 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 CLIP2Q9UDT6 1046 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 FBXO40Q9UH90 709 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 FEM1BQ9UK73 627 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 SMCHD1A6NHR9 2005 aa23.14■■□□□ 1.29
HDAC11-205ENST00000404548 A0A1W2PQ45 241 aaPredicted RBP23.13■■□□□ 1.29
HDAC11-205ENST00000404548 A0A1W2PQY0 241 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 M0R2C6 588 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 TTLL1O95922 423 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 PGK1P00558 417 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 CLTBP09497 229 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 FDX1P10109 184 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 SHHQ15465 462 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 TSHZ3Q63HK5 1081 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 DDX11Q96FC9 970 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 GUCD1Q96NT3 240 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 NACAP1Q9BZK3 213 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 FAM184BQ9ULE4 1060 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 RIPK3Q9Y572 518 aa23.13■■□□□ 1.29
HDAC11-205ENST00000404548 VCANP13611 3396 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 MOXD2PA6NHM9 499 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 KIAA0355O15063 1070 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 ERC2O15083 957 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 SMAD3P84022 425 aaKnown RBP23.12■■□□□ 1.29
HDAC11-205ENST00000404548 ZNF697Q5TEC3 545 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 ANKRD33Q7Z3H0 272 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 SH3RF1Q7Z6J0 888 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 IFNL3Q8IZI9 196 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 CHST13Q8NET6 341 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 TOX2Q96NM4 488 aa23.12■■□□□ 1.29
HDAC11-205ENST00000404548 SYNRGQ9UMZ2 1314 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 SNAI1O95863 264 aaPredicted RBP23.11■■□□□ 1.29
HDAC11-205ENST00000404548 APPP05067 770 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 CST5P28325 142 aaPredicted RBP23.11■■□□□ 1.29
HDAC11-205ENST00000404548 PDE4BQ07343 736 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 C9orf50Q5SZB4 431 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 KLHDC9Q8NEP7 349 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 NEDD1Q8NHV4 660 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 PI4K2BQ8TCG2 481 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 PRUNE2Q8WUY3 3088 aa23.11■■□□□ 1.29
HDAC11-205ENST00000404548 MYH4Q9Y623 1939 aa23.1■■□□□ 1.29
HDAC11-205ENST00000404548 DUSP11O75319 330 aaKnown RBP23.1■■□□□ 1.29
HDAC11-205ENST00000404548 SLC3A2P08195 630 aaKnown RBP23.1■■□□□ 1.29
HDAC11-205ENST00000404548 PPP4R3BQ5MIZ7 849 aa23.1■■□□□ 1.29
HDAC11-205ENST00000404548 CCSAPQ6IQ19 270 aaPredicted RBP23.1■■□□□ 1.29
HDAC11-205ENST00000404548 STK11IPQ8N1F8 1099 aa23.1■■□□□ 1.29
HDAC11-205ENST00000404548 CTDP1Q9Y5B0 961 aaPredicted RBP23.1■■□□□ 1.29
HDAC11-205ENST00000404548 PRDM1O75626 825 aa23.09■■□□□ 1.29
HDAC11-205ENST00000404548 ACLYP53396 1101 aa23.09■■□□□ 1.29
HDAC11-205ENST00000404548 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
HDAC11-205ENST00000404548 GMCL1Q96IK5 515 aa23.09■■□□□ 1.29
HDAC11-205ENST00000404548 ABHD16BQ9H3Z7 469 aa23.09■■□□□ 1.29
HDAC11-205ENST00000404548 TSPY3P0CV98 308 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 TSPY8P0CW00 308 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 BMP3P12645 472 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 ZMYM1Q5SVZ6 1142 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 CPXCR1Q8N123 301 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 ANKRD35Q8N283 1001 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 LENG1Q96BZ8 264 aaPredicted RBP23.08■■□□□ 1.29
HDAC11-205ENST00000404548 NAPBQ9H115 298 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 RAVER2Q9HCJ3 691 aaKnown RBP23.08■■□□□ 1.29
HDAC11-205ENST00000404548 STARD7Q9NQZ5 370 aa23.08■■□□□ 1.29
HDAC11-205ENST00000404548 ZHX1Q9UKY1 873 aaPredicted RBP23.08■■□□□ 1.29
HDAC11-205ENST00000404548 ELP1O95163 1332 aa23.08■■□□□ 1.28
HDAC11-205ENST00000404548 TMEM265A0A087WTH1 108 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 PLA2G6O60733 806 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 PQBP1O60828 265 aaKnown RBP23.07■■□□□ 1.28
HDAC11-205ENST00000404548 ITGB8P26012 769 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 ACVR2BQ13705 512 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 SLFN13Q68D06 897 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 LRRC47Q8N1G4 583 aaKnown RBP23.07■■□□□ 1.28
HDAC11-205ENST00000404548 FGD4Q96M96 766 aa23.07■■□□□ 1.28
HDAC11-205ENST00000404548 UPF3AQ9H1J1 476 aaKnown RBP23.07■■□□□ 1.28
HDAC11-205ENST00000404548 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.07■■□□□ 1.28
HDAC11-205ENST00000404548 MROH7Q68CQ1 1323 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms