RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TRMT1Q9NXH9 659 aaKnown RBP20.29■□□□□ 0.84
CHTOP-205ENST00000403433 NOVP48745 357 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 INF2Q27J81 1249 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 NYAP1Q6ZVC0 841 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 CERS5Q8N5B7 392 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
CHTOP-205ENST00000403433 KRT25Q7Z3Z0 450 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 CPVLQ9H3G5 476 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 INTS13Q9NVM9 706 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 ADAMTSL1Q8N6G6 1762 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 LAD1O00515 517 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 PLSCR1O15162 318 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 GTPBP6O43824 516 aaPredicted RBP20.27■□□□□ 0.84
CHTOP-205ENST00000403433 DOK7Q18PE1 504 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 SOGA3Q5TF21 947 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 KLHL10Q6JEL2 608 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
CHTOP-205ENST00000403433 KIF2AO00139 706 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-205ENST00000403433 MMP10P09238 476 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 GNA11P29992 359 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 STAT6P42226 847 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 GABPAQ06546 454 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 CUL4BQ13620 913 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 ZNF592Q92610 1267 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 STAMQ92783 540 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 MED15Q96RN5 788 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 MAP7D2Q96T17 732 aa20.26■□□□□ 0.83
CHTOP-205ENST00000403433 PSDA5PKW4 1024 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 USP17L5A8MUK1 530 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 APBA3O96018 575 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 CD44P16070 742 aaKnown RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 E4F1Q66K89 784 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 BLZF1Q9H2G9 400 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 SAMSN1Q9NSI8 373 aaKnown RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 USP40Q9NVE5 1235 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 RMND1Q9NWS8 449 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 MTMR4Q9NYA4 1195 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 SWAP70Q9UH65 585 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 SMCO2A6NFE2 343 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 NONOQ15233 471 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 ASPRV1Q53RT3 343 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 MTERF4Q7Z6M4 381 aaKnown RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 DDX4Q9NQI0 724 aaKnown RBP20.25■□□□□ 0.83
CHTOP-205ENST00000403433 DISC1Q9NRI5 854 aa20.25■□□□□ 0.83
CHTOP-205ENST00000403433 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 CCP110O43303 1012 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 PDHBP11177 359 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 PRPHP41219 470 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 SCNN1DP51172 638 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 SPECC1LQ69YQ0 1117 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 TEKT1Q969V4 418 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 PPP1R13BQ96KQ4 1090 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 TMEM60Q9H2L4 133 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 VAT1LQ9HCJ6 419 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 SERPINB13Q9UIV8 391 aa20.24■□□□□ 0.83
CHTOP-205ENST00000403433 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 hCG_1984214I3L0E3 225 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 AKR1B1P15121 316 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 STX17P56962 302 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 KARSQ15046 597 aaKnown RBP20.23■□□□□ 0.83
CHTOP-205ENST00000403433 HHIPL2Q6UWX4 724 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 SMYD4Q8IYR2 804 aaPredicted RBP20.23■□□□□ 0.83
CHTOP-205ENST00000403433 LRRC47Q8N1G4 583 aaKnown RBP20.23■□□□□ 0.83
CHTOP-205ENST00000403433 ZNF713Q8N859 430 aaPredicted RBP20.23■□□□□ 0.83
CHTOP-205ENST00000403433 PIGSQ96S52 555 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 CTNND2Q9UQB3 1225 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 C10orf71Q711Q0 1435 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 FRMPD2Q68DX3 1309 aaPredicted RBP20.23■□□□□ 0.83
CHTOP-205ENST00000403433 HLA-DOAP06340 250 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 UBA7P41226 1012 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 PTPN21Q16825 1174 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 TSC1Q92574 1164 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
CHTOP-205ENST00000403433 IGKV6D-41A0A0C4DH26 115 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 ESYT2A0FGR8 921 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 CDC25AP30304 524 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 TBX2Q13207 712 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-205ENST00000403433 RRAGBQ5VZM2 374 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHTOP-205ENST00000403433 MTRQ99707 1265 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 TMX1Q9H3N1 280 aa20.22■□□□□ 0.83
CHTOP-205ENST00000403433 A0A1B0GTH6 734 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CTIFO43310 598 aaKnown RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 TTLL1O95922 423 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 RPN1P04843 607 aaKnown RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 OR52Z1P0C646 297 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 LETM2Q2VYF4 491 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CDC42EP5Q6NZY7 148 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 NEK8Q86SG6 692 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 REXO1Q8N1G1 1221 aaKnown RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CCSER1Q9C0I3 900 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms