RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 PPP1R21Q6ZMI0 780 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 SLFN12Q8IYM2 578 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 IQCDQ96DY2 449 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 PANK4Q9NVE7 773 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 RPN1P04843 607 aaKnown RBP20.11■□□□□ 0.81
COL18A1-204ENST00000400337 MCTP2Q6DN12 878 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 ATG3Q9NT62 314 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 VIMP08670 466 aaKnown RBP20.11■□□□□ 0.81
COL18A1-204ENST00000400337 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 TSKSQ9UJT2 592 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 A0A1W2PQ27 194 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 A0A1W2PQ64 194 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 A0A1W2PQD8 194 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 SASH1O94885 1247 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 LONP1P36776 959 aaKnown RBP20.1■□□□□ 0.81
COL18A1-204ENST00000400337 GAS2L3Q86XJ1 694 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 CNKSR1Q969H4 720 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 SMCR8Q8TEV9 937 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-204ENST00000400337 U2AF1L4Q8WU68 220 aaKnown RBP20.1■□□□□ 0.81
COL18A1-204ENST00000400337 PAGR1Q9BTK6 254 aa20.1■□□□□ 0.81
COL18A1-204ENST00000400337 ARMCX3Q9UH62 379 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-204ENST00000400337 ATP5DP30049 168 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 STAT1P42224 750 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 SETDB1Q15047 1291 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 DEPTORQ8TB45 409 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 LCORLQ8N3X6 602 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 IWS1Q96ST2 819 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 RNF26Q9BY78 433 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 PCDHA5Q9Y5H7 936 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 ABCB5Q2M3G0 1257 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 SPATA1Q5VX52 437 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 PIGBQ92521 554 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 TRIM7Q9C029 511 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 PPEF1O14829 653 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 CSADQ9Y600 493 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 GOLGA6CA6NDK9 693 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 DAPK3O43293 454 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 SORBS3O60504 671 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 GOLGA6DP0CG33 693 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 PROCA1Q8NCQ7 364 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 EEF2KMTQ96G04 330 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 MRFAP1L1Q96HT8 127 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 FOXP1Q9H334 677 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-204ENST00000400337 GOLGA6AQ9NYA3 693 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 SAR1BQ9Y6B6 198 aa20.09■□□□□ 0.81
COL18A1-204ENST00000400337 ATP10DQ9P241 1426 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 IRX5P78411 483 aaPredicted RBP20.08■□□□□ 0.81
COL18A1-204ENST00000400337 CCDC105Q8IYK2 499 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 SERPINB2P05120 415 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 PLA2G4DQ86XP0 818 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 RASGRP4Q8TDF6 673 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 PLEKHA4Q9H4M7 779 aa20.08■□□□□ 0.81
COL18A1-204ENST00000400337 ABCB4P21439 1286 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 KIF1BO60333 1816 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 PREX2Q70Z35 1606 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 CYP4A11Q02928 519 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 POLA2Q14181 598 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 XKR9Q5GH70 373 aa20.08■□□□□ 0.8
COL18A1-204ENST00000400337 GOLGA6BA6NDN3 693 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 SNX16P57768 344 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 PAK2Q13177 524 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 CUL4AQ13619 759 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 CEP128Q6ZU80 1094 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 FAM178BQ8IXR5 827 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 PPARDQ03181 441 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 SND1Q7KZF4 910 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■□ 19.4
COL18A1-204ENST00000400337 QTRT2Q9H974 415 aaKnown RBP20.07■□□□□ 0.8
COL18A1-204ENST00000400337 KCNG1Q9UIX4 513 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 CFAP157Q5JU67 520 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 FAM26FQ5R3K3 315 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 LRRC8AQ8IWT6 810 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 ALDH3A1P30838 453 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 RAB3IL1Q8TBN0 382 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
COL18A1-204ENST00000400337 ERVV-1B6SEH8 477 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 K7ENM7 598 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 SPICE1Q8N0Z3 855 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■■■ 32.2
COL18A1-204ENST00000400337 PRPF6O94906 941 aaKnown RBP20.06■□□□□ 0.8
COL18A1-204ENST00000400337 GAS8O95995 478 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 TRPC5Q9UL62 973 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-204ENST00000400337 PPP6R2O75170 966 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
COL18A1-204ENST00000400337 POLR3EQ9NVU0 708 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 TRIM37O94972 964 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 DCAF15Q66K64 600 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 CEP57Q86XR8 500 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 GDAP1L1Q96MZ0 367 aa20.06■□□□□ 0.8
COL18A1-204ENST00000400337 TEKT3Q9BXF9 490 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms