RNA–Protein interactions for RNA: ENST00000399753.2

MSRB1-202, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-202ENST00000399753 PLXNA1Q9UIW2 1896 aa20.53■□□□□ 0.88
MSRB1-202ENST00000399753 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
MSRB1-202ENST00000399753 DCDC2CA8MYV0 355 aa20.52■□□□□ 0.88
MSRB1-202ENST00000399753 SNAI1O95863 264 aaPredicted RBP20.52■□□□□ 0.88
MSRB1-202ENST00000399753 MS4A1P11836 297 aa20.52■□□□□ 0.88
MSRB1-202ENST00000399753 KLHDC9Q8NEP7 349 aa20.52■□□□□ 0.88
MSRB1-202ENST00000399753 NUP88Q99567 741 aaPredicted RBP20.52■□□□□ 0.88
MSRB1-202ENST00000399753 SLF1Q9BQI6 1058 aa20.52■□□□□ 0.88
MSRB1-202ENST00000399753 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
MSRB1-202ENST00000399753 FAM184BQ9ULE4 1060 aa20.52■□□□□ 0.88
MSRB1-202ENST00000399753 SYNGAP1Q96PV0 1343 aa20.52■□□□□ 0.87
MSRB1-202ENST00000399753 DNAJC25-GNG10A0A024R161 153 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 MOXD2PA6NHM9 499 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 KCNA10Q16322 511 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 SNRNP48Q6IEG0 339 aaKnown RBP20.51■□□□□ 0.87
MSRB1-202ENST00000399753 CCSAPQ6IQ19 270 aaPredicted RBP20.51■□□□□ 0.87
MSRB1-202ENST00000399753 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 DDX11Q96FC9 970 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
MSRB1-202ENST00000399753 RIPK3Q9Y572 518 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 TTC28Q96AY4 2481 aa20.51■□□□□ 0.87
MSRB1-202ENST00000399753 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.5■□□□□ 0.87
MSRB1-202ENST00000399753 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.5■□□□□ 0.87
MSRB1-202ENST00000399753 DNAJB2P25686 324 aa20.5■□□□□ 0.87
MSRB1-202ENST00000399753 GRIN2CQ14957 1233 aa20.5■□□□□ 0.87
MSRB1-202ENST00000399753 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
MSRB1-202ENST00000399753 DDX19BQ9UMR2 479 aa20.5■□□□□ 0.87
MSRB1-202ENST00000399753 F5H6K3 240 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 DUSP11O75319 330 aaKnown RBP20.49■□□□□ 0.87
MSRB1-202ENST00000399753 TIMP1P01033 207 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 RASA1P20936 1047 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 KLRC3Q07444 240 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
MSRB1-202ENST00000399753 PRPF38AQ8NAV1 312 aaKnown RBP20.49■□□□□ 0.87
MSRB1-202ENST00000399753 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 ZHX1Q9UKY1 873 aaPredicted RBP20.49■□□□□ 0.87
MSRB1-202ENST00000399753 TBX21Q9UL17 535 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
MSRB1-202ENST00000399753 MYADML2A6NDP7 307 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 ATP2A1O14983 1001 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 NDUFB10O96000 172 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 SBK1Q52WX2 424 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 SYMPKQ92797 1274 aaKnown RBP20.48■□□□□ 0.87
MSRB1-202ENST00000399753 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
MSRB1-202ENST00000399753 MKNK2Q9HBH9 465 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 ELP1O95163 1332 aa20.48■□□□□ 0.87
MSRB1-202ENST00000399753 CST5P28325 142 aaPredicted RBP20.47■□□□□ 0.87
MSRB1-202ENST00000399753 CDK7P50613 346 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 MFSD5Q6N075 450 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 CPXCR1Q8N123 301 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 GLT1D1Q96MS3 346 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.875e-6■□□□□ 10.9
MSRB1-202ENST00000399753 ZNF576Q9H609 170 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 MROH7Q68CQ1 1323 aa20.47■□□□□ 0.87
MSRB1-202ENST00000399753 GREB1LQ9C091 1923 aaPredicted RBP20.47■□□□□ 0.87
MSRB1-202ENST00000399753 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 ZBED4O75132 1171 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
MSRB1-202ENST00000399753 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
MSRB1-202ENST00000399753 GIMAP6Q6P9H5 292 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.46■□□□□ 0.87
MSRB1-202ENST00000399753 USP38Q8NB14 1042 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 PCSK9Q8NBP7 692 aaKnown RBP20.46■□□□□ 0.87
MSRB1-202ENST00000399753 TIFAQ96CG3 184 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 PRDM6Q9NQX0 595 aa20.46■□□□□ 0.87
MSRB1-202ENST00000399753 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
MSRB1-202ENST00000399753 MYH7P12883 1935 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 ADCY6O43306 1168 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 ASGR1P07306 291 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 CCDC144BQ3MJ40 725 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 C16orf59Q7L2K0 433 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 KIFC2Q96AC6 838 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 FGD4Q96M96 766 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
MSRB1-202ENST00000399753 ABHD16BQ9H3Z7 469 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 SPC25Q9HBM1 224 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 SLC38A10Q9HBR0 1119 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 RAVER2Q9HCJ3 691 aaKnown RBP20.45■□□□□ 0.86
MSRB1-202ENST00000399753 CLIP2Q9UDT6 1046 aa20.45■□□□□ 0.86
MSRB1-202ENST00000399753 CTDP1Q9Y5B0 961 aaPredicted RBP20.45■□□□□ 0.86
MSRB1-202ENST00000399753 IGKV6D-41A0A0C4DH26 115 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 GJA9P57773 515 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 PPIGQ13427 754 aaKnown RBP eCLIP20.44■□□□□ 0.86
MSRB1-202ENST00000399753 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 ANKRD35Q8N283 1001 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 VTI1AQ96AJ9 217 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
MSRB1-202ENST00000399753 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
MSRB1-202ENST00000399753 ARVCFO00192 962 aa20.43■□□□□ 0.86
MSRB1-202ENST00000399753 RASIP1Q5U651 963 aa20.43■□□□□ 0.86
MSRB1-202ENST00000399753 CHST13Q8NET6 341 aa20.43■□□□□ 0.86
MSRB1-202ENST00000399753 MKL1Q969V6 931 aa20.43■□□□□ 0.86
MSRB1-202ENST00000399753 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
MSRB1-202ENST00000399753 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
MSRB1-202ENST00000399753 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms