RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MCM4P33991 863 aa31.73■■■□□ 2.67
CPNE1-203ENST00000397442 NPY5RQ15761 445 aa31.73■■■□□ 2.67
CPNE1-203ENST00000397442 SH3GLB2Q9NR46 395 aa31.73■■■□□ 2.67
CPNE1-203ENST00000397442 MYH15Q9Y2K3 1946 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 BACE1P56817 501 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 DGKZQ13574 1117 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 LPAR1Q92633 364 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 EMILIN3Q9NT22 766 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 BARHL2Q9NY43 387 aa31.72■■■□□ 2.67
CPNE1-203ENST00000397442 SEC63Q9UGP8 760 aaKnown RBP31.72■■■□□ 2.67
CPNE1-203ENST00000397442 STXBP3O00186 592 aa31.71■■■□□ 2.67
CPNE1-203ENST00000397442 DNM1Q05193 864 aaKnown RBP31.71■■■□□ 2.67
CPNE1-203ENST00000397442 AFG3L2Q9Y4W6 797 aa31.71■■■□□ 2.67
CPNE1-203ENST00000397442 CSADQ9Y600 493 aa31.71■■■□□ 2.67
CPNE1-203ENST00000397442 U2AF2P26368 475 aaKnown RBP eCLIP31.7■■■□□ 2.679e-27■■■■□ 22.3
CPNE1-203ENST00000397442 HEATR3Q7Z4Q2 680 aa31.7■■■□□ 2.67
CPNE1-203ENST00000397442 PNMA6FA0A0J9YX94 578 aa31.7■■■□□ 2.66
CPNE1-203ENST00000397442 SYDE2Q5VT97 1194 aa31.7■■■□□ 2.66
CPNE1-203ENST00000397442 DIS3L2Q8IYB7 885 aaKnown RBP31.7■■■□□ 2.66
CPNE1-203ENST00000397442 ANKRD13AQ8IZ07 590 aa31.7■■■□□ 2.66
CPNE1-203ENST00000397442 TRIM75PA6NK02 468 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 BTBD18B2RXH4 712 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 ZBTB5O15062 677 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 PLA2G6O60733 806 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 PPP1R11O60927 126 aaPredicted RBP31.69■■■□□ 2.66
CPNE1-203ENST00000397442 STAT2P52630 851 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 USP14P54578 494 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 TTLL12Q14166 644 aaPredicted RBP31.69■■■□□ 2.66
CPNE1-203ENST00000397442 OXER1Q8TDS5 423 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 CLMNQ96JQ2 1002 aa31.69■■■□□ 2.66
CPNE1-203ENST00000397442 WDR46O15213 610 aaKnown RBP31.68■■■□□ 2.66
CPNE1-203ENST00000397442 SAFBQ15424 915 aaKnown RBP eCLIP31.67■■■□□ 2.661e-17■■■■□ 20.2
CPNE1-203ENST00000397442 ARMC9Q7Z3E5 817 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 BRAPQ7Z569 592 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 CNKSR2Q8WXI2 1034 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 FOXP1Q9H334 677 aaPredicted RBP31.67■■■□□ 2.66
CPNE1-203ENST00000397442 PRR12Q9ULL5 1215 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 VCAM1P19320 739 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 IKQ13123 557 aaPredicted RBP31.67■■■□□ 2.66
CPNE1-203ENST00000397442 LDLRAD1Q5T700 205 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 FAM177A1Q8N128 213 aaPredicted RBP31.67■■■□□ 2.66
CPNE1-203ENST00000397442 C12orf42Q96LP6 360 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 CNPY2Q9Y2B0 182 aa31.67■■■□□ 2.66
CPNE1-203ENST00000397442 C19orf81C9J6K1 198 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 hCG_1984214I3L0E3 225 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 NR5A1Q13285 461 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 CDC37Q16543 378 aaPredicted RBP31.66■■■□□ 2.66
CPNE1-203ENST00000397442 QRICH1Q2TAL8 776 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 ZNF713Q8N859 430 aaPredicted RBP31.66■■■□□ 2.66
CPNE1-203ENST00000397442 ELP3Q9H9T3 547 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 FEM1BQ9UK73 627 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 PTPRFP10586 1907 aa31.66■■■□□ 2.66
CPNE1-203ENST00000397442 ADAMTS3O15072 1205 aa31.65■■■□□ 2.66
CPNE1-203ENST00000397442 NLRP5P59047 1200 aa31.65■■■□□ 2.66
CPNE1-203ENST00000397442 CHURC1Q8WUH1 139 aa31.65■■■□□ 2.66
CPNE1-203ENST00000397442 FBXO28Q9NVF7 368 aa31.65■■■□□ 2.66
CPNE1-203ENST00000397442 HMGCS2P54868 508 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 FAM160B2Q86V87 743 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 NOSTRINQ8IVI9 506 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 CCDC148Q8NFR7 591 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 TNFRSF25Q93038 417 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 ZNF408Q9H9D4 720 aa31.64■■■□□ 2.66
CPNE1-203ENST00000397442 KRT2P35908 639 aa31.64■■■□□ 2.65
CPNE1-203ENST00000397442 SNAP25P60880 206 aa31.64■■■□□ 2.65
CPNE1-203ENST00000397442 COA7Q96BR5 231 aa31.64■■■□□ 2.65
CPNE1-203ENST00000397442 ZMYND12Q9H0C1 365 aa31.64■■■□□ 2.65
CPNE1-203ENST00000397442 SPDYE5A6NIY4 337 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 CALML3P27482 149 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 NAPAP54920 295 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 SH3D19Q5HYK7 790 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 MYSM1Q5VVJ2 828 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 ERO1BQ86YB8 467 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 GDPD2Q9HCC8 539 aa31.63■■■□□ 2.65
CPNE1-203ENST00000397442 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.63■■■□□ 2.65
CPNE1-203ENST00000397442 PPATQ06203 517 aa31.62■■■□□ 2.65
CPNE1-203ENST00000397442 GNL2Q13823 731 aaKnown RBP31.62■■■□□ 2.65
CPNE1-203ENST00000397442 DAGLBQ8NCG7 672 aa31.62■■■□□ 2.65
CPNE1-203ENST00000397442 TFIP11Q9UBB9 837 aaKnown RBP31.62■■■□□ 2.65
CPNE1-203ENST00000397442 PARP14Q460N5 1801 aa31.62■■■□□ 2.65
CPNE1-203ENST00000397442 ITGBL1O95965 494 aaPredicted RBP31.61■■■□□ 2.65
CPNE1-203ENST00000397442 KRT85P78386 507 aa31.61■■■□□ 2.65
CPNE1-203ENST00000397442 RBM46Q8TBY0 533 aaKnown RBP31.61■■■□□ 2.65
CPNE1-203ENST00000397442 CCDC12Q8WUD4 166 aaPredicted RBP31.61■■■□□ 2.65
CPNE1-203ENST00000397442 RPAP3Q9H6T3 665 aaPredicted RBP31.61■■■□□ 2.65
CPNE1-203ENST00000397442 PCDHA4Q9UN74 947 aa31.61■■■□□ 2.65
CPNE1-203ENST00000397442 ESYT2A0FGR8 921 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 DDX11L8A8MPP1 907 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 M0R2N6 131 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 NCLP19338 710 aaKnown RBP31.6■■■□□ 2.65
CPNE1-203ENST00000397442 GALNT17Q6IS24 598 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 CHADLQ6NUI6 762 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 KIFC2Q96AC6 838 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 BRMS1Q9HCU9 246 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 BLIDQ8IZY5 108 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 OTUD5Q96G74 571 aa31.6■■■□□ 2.65
CPNE1-203ENST00000397442 RANBP17Q9H2T7 1088 aaKnown RBP31.6■■■□□ 2.65
CPNE1-203ENST00000397442 UNCXA6NJT0 531 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 IRF6O14896 467 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 FKBP1BP68106 108 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 EARS2Q5JPH6 523 aaKnown RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms