RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TXLNAP40222 546 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 PRPHP41219 470 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 FCHSD1Q86WN1 690 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 ZNF710Q8N1W2 664 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 RASGRP4Q8TDF6 673 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 PPP1R13BQ96KQ4 1090 aa19.04■□□□□ 0.64
NUP50-202ENST00000396096 SAMSN1Q9NSI8 373 aaKnown RBP19.04■□□□□ 0.64
NUP50-202ENST00000396096 TRMT1Q9NXH9 659 aaKnown RBP19.04■□□□□ 0.64
NUP50-202ENST00000396096 COL11A2P13942 1736 aaPredicted RBP19.04■□□□□ 0.64
NUP50-202ENST00000396096 MYO3BQ8WXR4 1341 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 A0A1B0GTH6 734 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 NR1I3Q14994 352 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 CDKAL1Q5VV42 579 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 MTRQ99707 1265 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 CASP1P29466 404 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 SPECC1LQ69YQ0 1117 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 DTHD1Q6ZMT9 781 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 APTXQ7Z2E3 356 aaKnown RBP19.03■□□□□ 0.64
NUP50-202ENST00000396096 KRT25Q7Z3Z0 450 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 AKT1S1Q96B36 256 aa19.03■□□□□ 0.64
NUP50-202ENST00000396096 RRP36Q96EU6 259 aaKnown RBP19.03■□□□□ 0.64
NUP50-202ENST00000396096 IGKV6D-41A0A0C4DH26 115 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 ESYT2A0FGR8 921 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 TMEM139Q8IV31 216 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 CERS5Q8N5B7 392 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.64
NUP50-202ENST00000396096 TSC1Q92574 1164 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 CCSER1Q9C0I3 900 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 RIOX1Q9H6W3 641 aa19.02■□□□□ 0.64
NUP50-202ENST00000396096 GREB1LQ9C091 1923 aaPredicted RBP19.02■□□□□ 0.63
NUP50-202ENST00000396096 GNA11P29992 359 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 NAPAP54920 295 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 SEMA3FQ13275 785 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 ORC2Q13416 577 aaPredicted RBP19.01■□□□□ 0.63
NUP50-202ENST00000396096 INF2Q27J81 1249 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
NUP50-202ENST00000396096 C6orf50Q9HD87 102 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 DISC1Q9NRI5 854 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 RMND1Q9NWS8 449 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 RIMBP2O15034 1052 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 PLSCR1O15162 318 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 USP17L2Q6R6M4 530 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 KIF18AQ8NI77 898 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 ANKRD7Q92527 254 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 TMEM60Q9H2L4 133 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 SWAP70Q9UH65 585 aa19.01■□□□□ 0.63
NUP50-202ENST00000396096 MYL1P05976 194 aa19■□□□□ 0.63
NUP50-202ENST00000396096 SNHG28P0DPA3 235 aa19■□□□□ 0.63
NUP50-202ENST00000396096 PDE6BP35913 854 aa19■□□□□ 0.63
NUP50-202ENST00000396096 HSP90AA4PQ58FG1 418 aa19■□□□□ 0.63
NUP50-202ENST00000396096 HHIPL2Q6UWX4 724 aa19■□□□□ 0.63
NUP50-202ENST00000396096 RASGRP2Q7LDG7 609 aa19■□□□□ 0.63
NUP50-202ENST00000396096 COL23A1Q86Y22 540 aaPredicted RBP19■□□□□ 0.63
NUP50-202ENST00000396096 CTAGE1Q96RT6 745 aa19■□□□□ 0.63
NUP50-202ENST00000396096 SEC63Q9UGP8 760 aaKnown RBP19■□□□□ 0.63
NUP50-202ENST00000396096 MTMR7Q9Y216 660 aa19■□□□□ 0.63
NUP50-202ENST00000396096 ARHGAP6O43182 974 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 PDHBP11177 359 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 STAT6P42226 847 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 NONOQ15233 471 aaKnown RBP eCLIP18.99■□□□□ 0.63
NUP50-202ENST00000396096 ASPRV1Q53RT3 343 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 ZNF658Q5TYW1 1059 aaPredicted RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 FLAD1Q8NFF5 587 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 AK8Q96MA6 479 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 BLZF1Q9H2G9 400 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 RWDD2AQ9UIY3 292 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 SMCO2A6NFE2 343 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 RPN1P04843 607 aaKnown RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 PBX1P40424 430 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 NAALADL2Q58DX5 795 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 KLHL10Q6JEL2 608 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 DPP8Q6V1X1 898 aaPredicted RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 TC2NQ8N9U0 490 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 STAMQ92783 540 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
NUP50-202ENST00000396096 DDX4Q9NQI0 724 aaKnown RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 TTF2Q9UNY4 1162 aaKnown RBP18.99■□□□□ 0.63
NUP50-202ENST00000396096 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 STX10O60499 249 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 KARSQ15046 597 aaKnown RBP18.98■□□□□ 0.63
NUP50-202ENST00000396096 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 SMYD4Q8IYR2 804 aaPredicted RBP18.98■□□□□ 0.63
NUP50-202ENST00000396096 MASTLQ96GX5 879 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 PIGSQ96S52 555 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 CUEDC2Q9H467 287 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 MAGEF1Q9HAY2 307 aa18.98■□□□□ 0.63
NUP50-202ENST00000396096 STX17P56962 302 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 PICALMQ13492 652 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 KCNB1Q14721 858 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 RRAGBQ5VZM2 374 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 CTNND2Q9UQB3 1225 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 OR52Z1P0C646 297 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 AKR1B1P15121 316 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms