RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 HDAC6Q9UBN7 1215 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 KIAA1024Q9UPX6 916 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 MTMR7Q9Y216 660 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 HCN4Q9Y3Q4 1203 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 RPGRIP1LQ68CZ1 1315 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 KIF15Q9NS87 1388 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 LOC102724428A0A0B4J2F2 783 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 RBM47A0AV96 593 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 F8VZ95 297 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 ZBTB7BO15156 539 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SH3BP5O60239 455 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 PPFIA4O75335 1185 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 KRT38O76015 456 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SLU7O95391 586 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 KCNA2P16389 499 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 RPL17P18621 184 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 TRIM21P19474 475 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 MCM3P25205 808 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 RXRBP28702 533 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 MCM2P49736 904 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SIK1P57059 783 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 NLRP5P59047 1200 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 CCT2P78371 535 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 CNGA3Q16281 694 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 ZFYVE27Q5T4F4 411 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 EP400NLQ6ZTU2 488 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SYDE1Q6ZW31 735 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 GET4Q7L5D6 327 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SPATA21Q7Z572 469 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 YTHDF3Q7Z739 585 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 GGNQ86UU5 652 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 MORC1Q86VD1 984 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 GAS2L3Q86XJ1 694 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 AMOTL1Q8IY63 956 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 TNS4Q8IZW8 715 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 ERMNQ8TAM6 284 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 FAM81AQ8TBF8 368 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 CCHCR1Q8TD31 782 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 P3H4Q92791 437 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 PPP2R3CQ969Q6 453 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 HOOK2Q96ED9 719 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 MISP3Q96FF7 219 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 BICD1Q96G01 975 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 TCHPQ9BT92 498 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 RWDD1Q9H446 243 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 TSPY26PQ9H489 355 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 ZSCAN16Q9H4T2 348 aaPredicted RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 ZC3H7BQ9UGR2 993 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 CIDEBQ9UHD4 219 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 DDX25Q9UHL0 483 aaKnown RBP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 GGA2Q9UJY4 613 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 SSX2IPQ9Y2D8 614 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 FAN1Q9Y2M0 1017 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 DAAM1Q9Y4D1 1078 aa4.11□□□□□ -1.75
XRCC4-203ENST00000396027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
XRCC4-203ENST00000396027 KAT6BQ8WYB5 2073 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 SOS1Q07889 1333 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 RAB3GAP2Q9H2M9 1393 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 PPIP5K1Q6PFW1 1433 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 GOLGA6L10A0A0M3HER8 536 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 GOLGA6L7A0A1B0GV03 622 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TARSL2A2RTX5 802 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC162PA2VCL2 907 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 MEGF11A6BM72 1044 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 A6NJR5 290 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 LINC01387J3KSC0 135 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 EBAG9O00559 213 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 NFIBO00712 420 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CYTH3O43739 400 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 MTRF1O75570 445 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 VIL1P09327 827 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CT47B1P0C2W7 299 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 H2AFXP16104 143 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 FERP16591 822 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 FUT4P22083 530 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CHMLP26374 656 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 STIP1P31948 543 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 FNTAP49354 379 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 NEK2P51955 445 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TUBA4AP68366 448 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 MRPS25P82663 173 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 ROR2Q01974 943 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 USH1GQ495M9 461 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 PREPLQ4J6C6 727 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TBCELQ5QJ74 424 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CEP85LQ5SZL2 805 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 WLSQ5T9L3 541 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 DUSP27Q5VZP5 1158 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 STAG2Q8N3U4 1231 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC150Q8NCX0 1101 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 USP33Q8TEY7 942 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TEKT4Q8WW24 435 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 GLMNQ92990 594 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 COL26A1Q96A83 441 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 ZNF428Q96B54 188 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 NAF1Q96HR8 494 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 SPATA32Q96LK8 384 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms