RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.2
CXCL12-205ENST00000395794 ORC4O43929 436 aa16.26■□□□□ 0.19
CXCL12-205ENST00000395794 COBLO75128 1261 aa16.26■□□□□ 0.19
CXCL12-205ENST00000395794 SLC1A4P43007 532 aa16.26■□□□□ 0.19
CXCL12-205ENST00000395794 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 CPXCR1Q8N123 301 aa16.26■□□□□ 0.19
CXCL12-205ENST00000395794 DIS3LQ8TF46 1054 aaKnown RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
CXCL12-205ENST00000395794 DDX20Q9UHI6 824 aaKnown RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-205ENST00000395794 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 FDX1P10109 184 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
CXCL12-205ENST00000395794 STAT2P52630 851 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 LHX8Q68G74 356 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
CXCL12-205ENST00000395794 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-205ENST00000395794 FAM160B2Q86V87 743 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 GMCL1Q96IK5 515 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-205ENST00000395794 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
CXCL12-205ENST00000395794 GREB1LQ9C091 1923 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-205ENST00000395794 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 ZNF213O14771 459 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 OAZ1P54368 228 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 REPS2Q8NFH8 660 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 MAML3Q96JK9 1138 aa16.24■□□□□ 0.19
CXCL12-205ENST00000395794 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 PGK2P07205 417 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 FGRP09769 529 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 MCCP23508 829 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 HAND2P61296 217 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 HABP4Q5JVS0 413 aaKnown RBP16.23■□□□□ 0.19
CXCL12-205ENST00000395794 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 SLC38A10Q9HBR0 1119 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 IL17RBQ9NRM6 502 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 COLQQ9Y215 455 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-205ENST00000395794 DIS3Q9Y2L1 958 aaKnown RBP16.23■□□□□ 0.19
CXCL12-205ENST00000395794 RLFQ13129 1914 aa16.23■□□□□ 0.19
CXCL12-205ENST00000395794 SEPT4O43236 478 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 NMT2O60551 498 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 CYBAP13498 195 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 AKNAD1Q5T1N1 836 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 RCSD1Q6JBY9 416 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 ARRDC4Q8NCT1 418 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
CXCL12-205ENST00000395794 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
CXCL12-205ENST00000395794 SLC34A2O95436 690 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 TOP1P11387 765 aaKnown RBP16.21■□□□□ 0.19
CXCL12-205ENST00000395794 NT5C2P49902 561 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-205ENST00000395794 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 C7orf61Q8IZ16 206 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 TRPV1Q8NER1 839 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 CHST13Q8NET6 341 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 ESR2Q92731 530 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 TINF2Q9BSI4 451 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 CNPY2Q9Y2B0 182 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
CXCL12-205ENST00000395794 PLA2G6O60733 806 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 IGHA2P01877 340 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 ZNF792Q3KQV3 632 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
CXCL12-205ENST00000395794 TTC14Q96N46 770 aa16.2■□□□□ 0.18
CXCL12-205ENST00000395794 KBTBD13C9JR72 458 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 DNM1LO00429 736 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 NOVP48745 357 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
CXCL12-205ENST00000395794 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 RUFY2Q8WXA3 655 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-205ENST00000395794 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
CXCL12-205ENST00000395794 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 PARP14Q460N5 1801 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 RARBP10826 455 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 COL6A1P12109 1028 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 PDE4AP27815 886 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
CXCL12-205ENST00000395794 DSCC1Q9BVC3 393 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms