RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 GPKOWQ92917 476 aaPredicted RBP eCLIP18.3■□□□□ 0.52
PHTF1-205ENST00000393357 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
PHTF1-205ENST00000393357 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 AKR1B10O60218 316 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 RPSAP08865 295 aaKnown RBP18.3■□□□□ 0.52
PHTF1-205ENST00000393357 RDXP35241 583 aaKnown RBP18.3■□□□□ 0.52
PHTF1-205ENST00000393357 KRT2P35908 639 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 HLTFQ14527 1009 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHTF1-205ENST00000393357 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 MTRQ99707 1265 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 SPA17Q15506 151 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 FAM47AQ5JRC9 791 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 OR2W6PQ8NHA6 318 aa18.3■□□□□ 0.52
PHTF1-205ENST00000393357 E7EVH7 732 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 HSF2BPO75031 334 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 PBX1P40424 430 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 TDRD12Q587J7 1177 aaKnown RBP18.29■□□□□ 0.52
PHTF1-205ENST00000393357 TRIML1Q8N9V2 468 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 GIMAP7Q8NHV1 300 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 TNKSO95271 1327 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 EIF4E1BA6NMX2 242 aaKnown RBP18.29■□□□□ 0.52
PHTF1-205ENST00000393357 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
PHTF1-205ENST00000393357 NNTQ13423 1086 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 ODF2Q5BJF6 829 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 KLHL7Q8IXQ5 586 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 HAUS4Q9H6D7 363 aa18.29■□□□□ 0.52
PHTF1-205ENST00000393357 FAM153BP0C7A2 387 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 XBP1P17861 261 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 SCP2P22307 547 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 FAM153CQ494X1 144 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 WDR59Q6PJI9 974 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 CSGALNACT2Q8N6G5 542 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 GEMIN8Q9NWZ8 242 aaKnown RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 FAM153AQ9UHL3 310 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 WTIPA6NIX2 430 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 RPN1P04843 607 aaKnown RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 BCAMP50895 628 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 GUCY2DQ02846 1103 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 WDR93Q6P2C0 686 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 TTMPQ5BVD1 217 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 MB21D1Q8N884 522 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 FOXP1Q9H334 677 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 GOLPH3Q9H4A6 298 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 BRMS1Q9HCU9 246 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
PHTF1-205ENST00000393357 SOS2Q07890 1332 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-205ENST00000393357 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 PPFIA1Q13136 1202 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 NT5DC1Q5TFE4 455 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 GSDMAQ96QA5 445 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 CARSP49589 748 aaKnown RBP18.27■□□□□ 0.52
PHTF1-205ENST00000393357 HLFQ16534 295 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
PHTF1-205ENST00000393357 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 EPB41L5Q9HCM4 733 aa18.27■□□□□ 0.52
PHTF1-205ENST00000393357 PLEKHG1Q9ULL1 1385 aa18.27■□□□□ 0.51
PHTF1-205ENST00000393357 EIF3HO15372 352 aaKnown RBP eCLIP18.27■□□□□ 0.51
PHTF1-205ENST00000393357 C8orf74Q6P047 294 aa18.27■□□□□ 0.51
PHTF1-205ENST00000393357 ZIM3Q96PE6 472 aa18.27■□□□□ 0.51
PHTF1-205ENST00000393357 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.51
PHTF1-205ENST00000393357 FTCDO95954 541 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 RASSF7Q02833 373 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 CKAP4Q07065 602 aaKnown RBP18.26■□□□□ 0.51
PHTF1-205ENST00000393357 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 CYLC1P35663 651 aaPredicted RBP18.26■□□□□ 0.51
PHTF1-205ENST00000393357 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
PHTF1-205ENST00000393357 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 TUBGCP2Q9BSJ2 902 aa18.26■□□□□ 0.51
PHTF1-205ENST00000393357 SKAP2O75563 359 aaPredicted RBP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 CFAP58Q5T655 872 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 SPATA4Q8NEY3 305 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 TBC1D31Q96DN5 1066 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 FAM184BQ9ULE4 1060 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 GSG1L2A8MUP6 293 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 CYP7A1P22680 504 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 KRT83P78385 493 aa18.25■□□□□ 0.51
PHTF1-205ENST00000393357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHTF1-205ENST00000393357 NACAP1Q9BZK3 213 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms