RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SLC44A5Q8NCS7 719 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 RBM17Q96I25 401 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 MAN1B1Q9UKM7 699 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ABCC2Q92887 1545 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 FTCDO95954 541 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 ZNF853P0CG23 659 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GNGT1P63211 74 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 GUCY2DQ02846 1103 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 OXER1Q8TDS5 423 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 PCIF1Q9H4Z3 704 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
LTN1-202ENST00000389194 UTP11Q9Y3A2 253 aaKnown RBP5.53□□□□□ -1.52
LTN1-202ENST00000389194 TRIM49BA6NDI0 452 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 ALAS1P13196 640 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 TNNI1P19237 187 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 NECTIN1Q15223 517 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 FMNL3Q8IVF7 1028 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 LINC00301Q8NCQ3 95 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 KIAA1524Q8TCG1 905 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PSTPIP2Q9H939 334 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MBD5Q9P267 1494 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MROH5Q6ZUA9 1318 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 TOM1O60784 492 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 TBC1D8O95759 1140 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 INPP5BP32019 993 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MCAMP43121 646 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 ZNF131P52739 623 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 KIF23Q02241 960 aaPredicted RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 LONRF2Q1L5Z9 754 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 FAM102BQ5T8I3 360 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 KIF2CQ99661 725 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.52□□□□□ -1.53
LTN1-202ENST00000389194 MTRF1LQ9UGC7 380 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 BAIAP2L1Q9UHR4 511 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 GDAQ9Y2T3 454 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 EPN1Q9Y6I3 576 aaPredicted RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 SNX1Q13596 522 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CUL4AQ13619 759 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SCARF1Q14162 830 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 POLA2Q14181 598 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 KRT12Q99456 494 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PAGR1Q9BTK6 254 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PANK4Q9NVE7 773 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SAMD9Q5K651 1589 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 TMEM2Q9UHN6 1383 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PLA2R1Q13018 1463 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SYNJ2BP-COX16A0A087WUM0 186 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 LOC102724428A0A0B4J2F2 783 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 HSPA1LP34931 641 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CCT5P48643 541 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SIK1P57059 783 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MKRN4PQ13434 485 aaPredicted RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 RASGRF1Q13972 1273 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 NBPF14Q5TI25 921 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CASC4Q6P4E1 433 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 THOC1Q96FV9 657 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 CNOT6LQ96LI5 555 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 COX16Q9P0S2 106 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 ABCA5Q8WWZ7 1642 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SLCO1A2P46721 670 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 RESTQ13127 1097 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PARP10Q53GL7 1025 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 FBXO38Q6PIJ6 1188 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CYB5R4Q7L1T6 521 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MAK16Q9BXY0 300 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 TSGA10Q9BZW7 698 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SCAF8Q9UPN6 1271 aaKnown RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 FAN1Q9Y2M0 1017 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PP2D1A8MPX8 630 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MOCS3O95396 460 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 HOXA13P31271 388 aaPredicted RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 IFRD2Q12894 506 aaPredicted RBP5.52□□□□□ -1.53
LTN1-202ENST00000389194 SLC39A14Q15043 492 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 TOGARAM2Q6ZUX3 1019 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 MIGA2Q7L4E1 593 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 IFT20Q8IY31 132 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 PPM1KQ8N3J5 372 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 METTL13Q8N6R0 699 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 CCDC77Q9BR77 488 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 SUGCTQ9HAC7 445 aa5.52□□□□□ -1.53
LTN1-202ENST00000389194 KRIT1O00522 736 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 PRR29P0C7W0 189 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 SMAD1Q15797 465 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 DCUN1D2Q6PH85 259 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CABS1Q96KC9 395 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 PIGSQ96S52 555 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TUBGCP2Q9BSJ2 902 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 IRX2Q9BZI1 471 aaPredicted RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 DDX25Q9UHL0 483 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 SAMD9LQ8IVG5 1584 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ADGBQ8N7X0 1667 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 GAS7O60861 476 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ATF7P17544 494 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms