RNA–Protein interactions for RNA: ENST00000380966.8

LCMT1-202, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCMT1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-202ENST00000380966 CDKL5O76039 1030 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
LCMT1-202ENST00000380966 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 HSCBQ8IWL3 235 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 MB21D1Q8N884 522 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.27
LCMT1-202ENST00000380966 MAD2L2Q9UI95 211 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
LCMT1-202ENST00000380966 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
LCMT1-202ENST00000380966 DSG3P32926 999 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 GCLCP48506 637 aaPredicted RBP16.7■□□□□ 0.26
LCMT1-202ENST00000380966 HERVK_113P62684 666 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
LCMT1-202ENST00000380966 AKAP17AQ02040 695 aaKnown RBP16.7■□□□□ 0.26
LCMT1-202ENST00000380966 ZIC5Q96T25 663 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 PTPN18Q99952 460 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
LCMT1-202ENST00000380966 PNMA2Q9UL42 364 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
LCMT1-202ENST00000380966 NID2Q14112 1375 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 SLC16A2P36021 539 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 TRAF1Q13077 416 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 BTNL9Q6UXG8 535 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 RASGRP2Q7LDG7 609 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 UBA5Q9GZZ9 404 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
LCMT1-202ENST00000380966 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
LCMT1-202ENST00000380966 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
LCMT1-202ENST00000380966 CA12O43570 354 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 PFKFB2O60825 505 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 CYP2C8P10632 490 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
LCMT1-202ENST00000380966 TRIM22Q8IYM9 498 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
LCMT1-202ENST00000380966 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
LCMT1-202ENST00000380966 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 PRR12Q9ULL5 1215 aa16.68■□□□□ 0.26
LCMT1-202ENST00000380966 CCNA1P78396 465 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 PLS1Q14651 629 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 LBX2Q6XYB7 198 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
LCMT1-202ENST00000380966 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 HPS5Q9UPZ3 1129 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 RABGAP1Q9Y3P9 1069 aa16.67■□□□□ 0.26
LCMT1-202ENST00000380966 PARP14Q460N5 1801 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 VWA5AO00534 786 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 TLR2O60603 784 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 COPB2P35606 906 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 ADD1P35611 737 aaKnown RBP16.66■□□□□ 0.26
LCMT1-202ENST00000380966 SCRN1Q12765 414 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 BECN1Q14457 450 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
LCMT1-202ENST00000380966 ME3Q16798 604 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 CCDC82Q8N4S0 544 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
LCMT1-202ENST00000380966 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
LCMT1-202ENST00000380966 TRPA1O75762 1119 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 CDC27P30260 824 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 OAZ1P54368 228 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
LCMT1-202ENST00000380966 CRHR2Q13324 411 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
LCMT1-202ENST00000380966 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 SNX21Q969T3 373 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
LCMT1-202ENST00000380966 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 RNF186Q9NXI6 227 aa16.65■□□□□ 0.26
LCMT1-202ENST00000380966 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
LCMT1-202ENST00000380966 ZBTB5O15062 677 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
LCMT1-202ENST00000380966 IFNAR1P17181 557 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
LCMT1-202ENST00000380966 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 CPXCR1Q8N123 301 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 DNAJC5GQ8N7S2 189 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 TMX3Q96JJ7 454 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 RNF26Q9BY78 433 aaPredicted RBP16.64■□□□□ 0.25
LCMT1-202ENST00000380966 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 CCPG1Q9ULG6 757 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 MYH6P13533 1939 aa16.64■□□□□ 0.25
LCMT1-202ENST00000380966 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms