RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NR2E3Q9Y5X4 410 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 PLIN4Q96Q06 1357 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 SGSM2O43147 1006 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 PEX10O60683 326 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 ZMYND10O75800 440 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 TTLL1O95922 423 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 MYCP01106 439 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-202ENST00000380747 CTGFP29279 349 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 GRK4P32298 578 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 FCGRTP55899 365 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 PTH1RQ03431 593 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 IMMTQ16891 758 aaKnown RBP10.91□□□□□ -0.66
HMGN1-202ENST00000380747 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
HMGN1-202ENST00000380747 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
HMGN1-202ENST00000380747 PAGR1Q9BTK6 254 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 NBPF3Q9H094 633 aa10.91□□□□□ -0.66
HMGN1-202ENST00000380747 WDR46O15213 610 aaKnown RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 EVI5O60447 810 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 NMT2O60551 498 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 FLOT1O75955 427 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 NDUFB10O96000 172 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 FGRP09769 529 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 PCP11498 1178 aaKnown RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 COG2Q14746 738 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 FAM83BQ5T0W9 1011 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 CASC1Q6TDU7 716 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 KIAA1211Q6ZU35 1233 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 GPRC5AQ8NFJ5 357 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 RAET1EQ8TD07 263 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 GTF3C2Q8WUA4 911 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 STAG1Q8WVM7 1258 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 ESYT1Q9BSJ8 1104 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 TXNRD2Q9NNW7 524 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 MORF4L1Q9UBU8 362 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 ISY1Q9ULR0 285 aaKnown RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
HMGN1-202ENST00000380747 LAMA2P24043 3122 aaKnown RBP10.9□□□□□ -0.66
HMGN1-202ENST00000380747 NEDD4P46934 1319 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 F5H6K3 240 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 DLL1O00548 723 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
HMGN1-202ENST00000380747 CDC45O75419 566 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 CCL5P13501 91 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 UBXN2AP68543 259 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 KLRC3Q07444 240 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
HMGN1-202ENST00000380747 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 SLC17A8Q8NDX2 589 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 ESR2Q92731 530 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 DDX12PQ92771 950 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 HOXC10Q9NYD6 342 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
HMGN1-202ENST00000380747 MYPNQ86TC9 1320 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 B4E1Z4 1266 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 KDM4AO75164 1064 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 FARP2O94887 1054 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-202ENST00000380747 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 ERVK-24P63145 666 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 PRKCZQ05513 592 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 Q3C1V9 767 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 GMCL1P1Q8NEA9 526 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 U2AF1L4Q8WU68 220 aaKnown RBP10.88□□□□□ -0.67
HMGN1-202ENST00000380747 MKL1Q969V6 931 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 COA7Q96BR5 231 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 ATG4CQ96DT6 458 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 RNF208Q9H0X6 261 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 CWC22Q9HCG8 908 aaKnown RBP10.88□□□□□ -0.67
HMGN1-202ENST00000380747 ANO2Q9NQ90 1003 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 VCANP13611 3396 aa10.88□□□□□ -0.67
HMGN1-202ENST00000380747 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-202ENST00000380747 CNMDO75829 334 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 SGPL1O95470 568 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 CYP21A2P08686 494 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 CCNA1P78396 465 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 WDR78Q5VTH9 848 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 MAP4K1Q92918 833 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 KRT23Q9C075 422 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 TCP11L1Q9NUJ3 509 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 BTBD7Q9P203 1132 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
HMGN1-202ENST00000380747 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
HMGN1-202ENST00000380747 TOP1P11387 765 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms