RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ANAPC4Q9UJX5 808 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 MACROD2A1Z1Q3 448 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 UFL1O94874 794 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 H2AFXP16104 143 aaPredicted RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 OAS2P29728 719 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 NAP1L1P55209 391 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 NCAPH2Q6IBW4 605 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 FBXO33Q7Z6M2 555 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 RPGRQ92834 1020 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 MTRQ99707 1265 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 SUGCTQ9HAC7 445 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 MPHOSPH10O00566 681 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 TUBB4AP04350 444 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 GABPB1Q06547 395 aaPredicted RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 SF3B3Q15393 1217 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 CCDC47Q96A33 483 aaKnown RBP14.54□□□□□ -0.08
USP11-204ENST00000377107 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 PSMA7O14818 248 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 ZMYND10O75800 440 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 MATR3P43243 847 aaKnown RBP eCLIP14.54□□□□□ -0.08
USP11-204ENST00000377107 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 NT5DC1Q5TFE4 455 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 IL17RBQ9NRM6 502 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 EXOC1Q9NV70 894 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
USP11-204ENST00000377107 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 SMCO2A6NFE2 343 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 G3V3G9 751 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 MYO1BO43795 1136 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 KCNJ6P48051 423 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 PMS1P54277 932 aaKnown RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 NPY5RQ15761 445 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 FCHSD1Q86WN1 690 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 PCDHA4Q9UN74 947 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 SRGAP2O75044 1071 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 KLK7P49862 253 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 MRPS25P82663 173 aaKnown RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 CYP27A1Q02318 531 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 CCDC122Q5T0U0 273 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 LRRC47Q8N1G4 583 aaKnown RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 EYA3Q99504 573 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 CDCA7Q9BWT1 371 aaPredicted RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 COL1A1P02452 1464 aaPredicted RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 PLA2G4AP47712 749 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 SMC1AQ14683 1233 aaKnown RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 RCSD1Q6JBY9 416 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 TMEM47Q9BQJ4 181 aa14.53□□□□□ -0.08
USP11-204ENST00000377107 ZNHIT6Q9NWK9 470 aaKnown RBP14.53□□□□□ -0.08
USP11-204ENST00000377107 PLEKHG2Q9H7P9 1386 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 TTC26A0AVF1 554 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 BTDP43251 543 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 TNNI2P48788 182 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 ERVK-24P63145 666 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 CABP7Q86V35 215 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.08
USP11-204ENST00000377107 GJA10Q969M2 543 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 COA7Q96BR5 231 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 PANX2Q96RD6 677 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 DISC1Q9NRI5 854 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 ABHD10Q9NUJ1 306 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 TMEM260Q9NX78 707 aa14.52□□□□□ -0.08
USP11-204ENST00000377107 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.08
USP11-204ENST00000377107 CTAGE15A4D2H0 777 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 CTAGE8P0CG41 777 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 PLCG1P19174 1290 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 LMAN1P49257 510 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 ZNF658Q5TYW1 1059 aaPredicted RBP14.52□□□□□ -0.09
USP11-204ENST00000377107 CYP26C1Q6V0L0 522 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 CTAGE6Q86UF2 777 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 GPR161Q8N6U8 529 aaKnown RBP14.52□□□□□ -0.09
USP11-204ENST00000377107 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 FCER1AP12319 257 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 SPAG1Q07617 926 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
USP11-204ENST00000377107 AMIGO3Q86WK7 504 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 PIGSQ96S52 555 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 NAPGQ99747 312 aaPredicted RBP14.52□□□□□ -0.09
USP11-204ENST00000377107 DEF6Q9H4E7 631 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 PLEKHA4Q9H4M7 779 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 MMRN2Q9H8L6 949 aa14.52□□□□□ -0.09
USP11-204ENST00000377107 JADE2Q9NQC1 790 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms