RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 HMGCRP04035 888 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 GABPAQ06546 454 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 CCL14Q16627 93 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 CRACR2BQ8N4Y2 399 aaPredicted RBP11.61□□□□□ -0.55
C9orf85-202ENST00000377027 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
C9orf85-202ENST00000377027 PAWRQ96IZ0 340 aaKnown RBP11.61□□□□□ -0.55
C9orf85-202ENST00000377027 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 EHD4Q9H223 541 aa11.61□□□□□ -0.55
C9orf85-202ENST00000377027 C19orf81C9J6K1 198 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 PDE6AP16499 860 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 ERVK-24P63145 666 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 IRX3P78415 501 aaPredicted RBP11.6□□□□□ -0.55
C9orf85-202ENST00000377027 PABPC4Q13310 644 aaKnown RBP eCLIP11.6□□□□□ -0.55
C9orf85-202ENST00000377027 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
C9orf85-202ENST00000377027 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
C9orf85-202ENST00000377027 PRKD2Q9BZL6 878 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 SERPINB13Q9UIV8 391 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 A0A0C4DFX4 3053 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 PFASO15067 1338 aa11.6□□□□□ -0.55
C9orf85-202ENST00000377027 CDH23Q9H251 3354 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 SOX1O00570 391 aaPredicted RBP11.59□□□□□ -0.55
C9orf85-202ENST00000377027 TFRCP02786 760 aaKnown RBP11.59□□□□□ -0.55
C9orf85-202ENST00000377027 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 CYP2D6P10635 497 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 CYP2B6P20813 491 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 USP5P45974 858 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 KIAA1755Q5JYT7 1200 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 HTATIP2Q9BUP3 242 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 TMOD4Q9NZQ9 345 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 BTBD7Q9P203 1132 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 RPTORQ8N122 1335 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
C9orf85-202ENST00000377027 IGHA2P01877 340 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 VCAM1P19320 739 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 MAP3K12Q12852 859 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 SLC44A5Q8NCS7 719 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 GPRC5AQ8NFJ5 357 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 SDR42E1Q8WUS8 393 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 OGDHLQ9ULD0 1010 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
C9orf85-202ENST00000377027 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
C9orf85-202ENST00000377027 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
C9orf85-202ENST00000377027 APBB1O00213 710 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 GOLIM4O00461 696 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 PRKAB2O43741 272 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 CCND3P30281 292 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-202ENST00000377027 SLC19A1P41440 591 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-202ENST00000377027 SEPT2Q15019 361 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 RAB3GAP1Q15042 981 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 PTPRNQ16849 979 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 CERKLQ49MI3 558 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-202ENST00000377027 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 SIAH1Q8IUQ4 282 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
C9orf85-202ENST00000377027 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 TRIM34Q9BYJ4 488 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 DCP1AQ9NPI6 582 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-202ENST00000377027 LTBP2Q14767 1821 aa11.57□□□□□ -0.56
C9orf85-202ENST00000377027 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 COL6A1P12109 1028 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 XRCC5P13010 732 aaKnown RBP11.56□□□□□ -0.56
C9orf85-202ENST00000377027 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 SOCS4Q8WXH5 440 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 TSC1Q92574 1164 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 KIF1BPQ96EK5 621 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 DYNLL2Q96FJ2 89 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
C9orf85-202ENST00000377027 GDF15Q99988 308 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 ARMT1Q9H993 441 aa11.56□□□□□ -0.56
C9orf85-202ENST00000377027 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
C9orf85-202ENST00000377027 PLXNA1Q9UIW2 1896 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 CYP2D7A0A087X1C5 515 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms