RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MYH2Q9UKX2 1941 aa18.52■□□□□ 0.56
TRIM39-201ENST00000376656 LGALS16A8MUM7 142 aa18.52■□□□□ 0.55
TRIM39-201ENST00000376656 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 TSR1Q2NL82 804 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 KRT86O43790 486 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 KRT83P78385 493 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 AENQ8WTP8 325 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 RRP36Q96EU6 259 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 DEF6Q9H4E7 631 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 AGPAT5Q9NUQ2 364 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 FAM169AQ9Y6X4 670 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 H7C1D1 291 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 PRPF3O43395 683 aaKnown RBP18.51■□□□□ 0.55
TRIM39-201ENST00000376656 PPARAQ07869 468 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 LPIN2Q92539 896 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 JADE2Q9NQC1 790 aa18.51■□□□□ 0.55
TRIM39-201ENST00000376656 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 MACROD2A1Z1Q3 448 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 IDEP14735 1019 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 PUM3Q15397 648 aaKnown RBP18.5■□□□□ 0.55
TRIM39-201ENST00000376656 SND1Q7KZF4 910 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRIM39-201ENST00000376656 SUGP1Q8IWZ8 645 aaKnown RBP18.5■□□□□ 0.55
TRIM39-201ENST00000376656 HDAC7Q8WUI4 952 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 ERLIN2O94905 339 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 FGFR2P21802 821 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 MRPS25P82663 173 aaKnown RBP18.5■□□□□ 0.55
TRIM39-201ENST00000376656 TTC19Q6DKK2 380 aaPredicted RBP18.5■□□□□ 0.55
TRIM39-201ENST00000376656 EHBP1Q8NDI1 1231 aa18.5■□□□□ 0.55
TRIM39-201ENST00000376656 A0A1W2PQC6 194 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 MCM7P33993 719 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 KLK7P49862 253 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 CYP27A1Q02318 531 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 MTA3Q9BTC8 594 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 CAPS2Q9BXY5 557 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 FAM184BQ9ULE4 1060 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 EBAG9O00559 213 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 ADAMTS3O15072 1205 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 PPFIA1Q13136 1202 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 MEA1Q16626 185 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 FAM107BQ9H098 131 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 RMND1Q9NWS8 449 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 ZNF662Q6ZS27 426 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 PIK3AP1Q6ZUJ8 805 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 ADSSL1Q8N142 457 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 SDR42E1Q8WUS8 393 aa18.49■□□□□ 0.55
TRIM39-201ENST00000376656 NHEJ1Q9H9Q4 299 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 GEMIN8Q9NWZ8 242 aaKnown RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 PDS5AQ29RF7 1337 aaKnown RBP18.49■□□□□ 0.55
TRIM39-201ENST00000376656 DOCK2Q92608 1830 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 BAZ2BQ9UIF8 2168 aaKnown RBP18.48■□□□□ 0.55
TRIM39-201ENST00000376656 B4DLN1 442 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 GNAT2P19087 354 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 GIGYF2Q6Y7W6 1299 aaKnown RBP18.48■□□□□ 0.55
TRIM39-201ENST00000376656 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 DMGDHQ9UI17 866 aaKnown RBP18.48■□□□□ 0.55
TRIM39-201ENST00000376656 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 PAPPAQ13219 1627 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 PNPLA7Q6ZV29 1317 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 CYLC1P35663 651 aaPredicted RBP18.48■□□□□ 0.55
TRIM39-201ENST00000376656 GNGT1P63211 74 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 SMCR8Q8TEV9 937 aaPredicted RBP18.48■□□□□ 0.55
TRIM39-201ENST00000376656 EEF2KMTQ96G04 330 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 RASSF10A6NK89 507 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 LRRC1Q9BTT6 524 aa18.48■□□□□ 0.55
TRIM39-201ENST00000376656 ANO9A1A5B4 782 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 EIF3HO15372 352 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM39-201ENST00000376656 ESR2Q92731 530 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
TRIM39-201ENST00000376656 CREG2Q8IUH2 290 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 PURBQ96QR8 312 aaKnown RBP18.47■□□□□ 0.55
TRIM39-201ENST00000376656 TTYH3Q9C0H2 523 aa18.47■□□□□ 0.55
TRIM39-201ENST00000376656 EEF1GP26641 437 aaKnown RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 FBXW10Q5XX13 1052 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 MCTP2Q6DN12 878 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 SAMM50Q9Y512 469 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 TRIM21P19474 475 aaKnown RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 SLC7A5Q01650 507 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 ZSCAN10Q96SZ4 725 aaPredicted RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 TRMT112Q9UI30 125 aaKnown RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 MYH3P11055 1940 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 STAT6P42226 847 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 IFIT1BQ5T764 474 aaKnown RBP18.46■□□□□ 0.55
TRIM39-201ENST00000376656 CATIPQ7Z7H3 387 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 761.2 ms