RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
UBR4-203ENST00000375225 PPFIBP1Q86W92 1011 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 DAGLBQ8NCG7 672 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 CCDC47Q96A33 483 aaKnown RBP13.85□□□□□ -0.19
UBR4-203ENST00000375225 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 VWA3AA6NCI4 1184 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 KCNA3P22001 575 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 GRIN1Q05586 938 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 DPYDQ12882 1025 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 ORC2Q13416 577 aaPredicted RBP13.85□□□□□ -0.19
UBR4-203ENST00000375225 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 PSMD1Q99460 953 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 BAG1Q99933 345 aaPredicted RBP13.85□□□□□ -0.19
UBR4-203ENST00000375225 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
UBR4-203ENST00000375225 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 FOXN1O15353 648 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 ECE2O60344 883 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 PPP1R2P41236 205 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 AFMP43652 599 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 ETF1P62495 437 aaKnown RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 TBX2Q13207 712 aaPredicted RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 STIM1Q13586 685 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 TRIM14Q14142 442 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 DBNDD1Q9H9R9 158 aa13.84□□□□□ -0.19
UBR4-203ENST00000375225 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
UBR4-203ENST00000375225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBR4-203ENST00000375225 PSME4Q14997 1843 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 A0A1B0GTH6 734 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 AKR1B15C9JRZ8 316 aaPredicted RBP13.83□□□□□ -0.2
UBR4-203ENST00000375225 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 CYP2D6P10635 497 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 BMP6P22004 513 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 GNA11P29992 359 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 MCM7P33993 719 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
UBR4-203ENST00000375225 AOC3Q16853 763 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 ZNF397Q8NF99 534 aaPredicted RBP13.83□□□□□ -0.2
UBR4-203ENST00000375225 DPF2Q92785 391 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 EPSTI1Q96J88 318 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 VPS33BQ9H267 617 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 CUEDC2Q9H467 287 aa13.83□□□□□ -0.2
UBR4-203ENST00000375225 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
UBR4-203ENST00000375225 hCG_1642624A0A1W2PR95 340 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
UBR4-203ENST00000375225 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
UBR4-203ENST00000375225 PRPHP41219 470 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 STAT6P42226 847 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 FMR1Q06787 632 aaKnown RBP eCLIP13.82□□□□□ -0.23e-8■■■□□ 18.9
UBR4-203ENST00000375225 NR1I3Q14994 352 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 DIXDC1Q155Q3 683 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 NPY5RQ15761 445 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 SH3RF3Q8TEJ3 882 aaPredicted RBP13.82□□□□□ -0.2
UBR4-203ENST00000375225 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
UBR4-203ENST00000375225 AK8Q96MA6 479 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
UBR4-203ENST00000375225 RWDD2AQ9UIY3 292 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
UBR4-203ENST00000375225 ZNF646O15015 1829 aaPredicted RBP13.81□□□□□ -0.2
UBR4-203ENST00000375225 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 FAM205CA6NFA0 338 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 NMT2O60551 498 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 GRIK5Q16478 980 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 ZNF658Q5TYW1 1059 aaPredicted RBP13.81□□□□□ -0.2
UBR4-203ENST00000375225 SYT10Q6XYQ8 523 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 CNGA4Q8IV77 575 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 TEX11Q8IYF3 940 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 GRAMD1CQ8IYS0 662 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 BARHL2Q9NY43 387 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 GAKO14976 1311 aa13.81□□□□□ -0.2
UBR4-203ENST00000375225 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 GPR75-ASB3A0A0A6YYF3 556 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 USP17L3A6NCW0 530 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 USP17L4A6NCW7 530 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 BTDP43251 543 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 PAK1Q13153 545 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 CUL4BQ13620 913 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 EARS2Q5JPH6 523 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms