RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OSBPL9Q96SU4 736 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 HAUS4Q9H6D7 363 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 KCNMB3Q9NPA1 279 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 POSTNQ15063 836 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 AGAP11Q8TF27 550 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
SF3A3-201ENST00000373019 CHCHD3Q9NX63 227 aaKnown RBP10.65□□□□□ -0.7
SF3A3-201ENST00000373019 G3BP2Q9UN86 482 aaKnown RBP10.65□□□□□ -0.7
SF3A3-201ENST00000373019 GMNCA6NCL1 334 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 RCCD1A6NED2 376 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 C5orf60A6NFR6 353 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 B4DLN1 442 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 ATP2C2O75185 946 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 PLCD1P51178 756 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 ROR2Q01974 943 aaKnown RBP10.65□□□□□ -0.7
SF3A3-201ENST00000373019 FAM153CQ494X1 144 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 NCAPG2Q86XI2 1143 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 CD302Q8IX05 232 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 GRAMD1CQ8IYS0 662 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 HVCN1Q96D96 273 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 TSGA10Q9BZW7 698 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
SF3A3-201ENST00000373019 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 ATP4AP20648 1035 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 MTHFD1LQ6UB35 978 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 SPATA21Q7Z572 469 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 SPATA20Q8TB22 786 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 RUBCNQ92622 972 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 ATP6V1G3Q96LB4 118 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 ZCWPW1Q9H0M4 648 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 NDST4Q9H3R1 872 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 PANK4Q9NVE7 773 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■■□□□ 14.1
SF3A3-201ENST00000373019 SLC12A6Q9UHW9 1150 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 SRCAPQ6ZRS2 3230 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 RNF8O76064 485 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 NEFHP12036 1026 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 GCLCP48506 637 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 B4GALNT2Q8NHY0 566 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 CCDC43Q96MW1 224 aaKnown RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 TMX4Q9H1E5 349 aaPredicted RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 RGL1Q9NZL6 768 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 NDUFB9Q9Y6M9 179 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 GNAT1P11488 350 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 PPARDQ03181 441 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 CCDC122Q5T0U0 273 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 HAUS3Q68CZ6 603 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 C1orf131Q8NDD1 294 aaKnown RBP10.64□□□□□ -0.71
SF3A3-201ENST00000373019 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 CNKSR1Q969H4 720 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 LACRTQ9GZZ8 138 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 PCDHGA4Q9Y5G9 962 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 DUSP10Q9Y6W6 482 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 USP6P35125 1406 aa10.64□□□□□ -0.71
SF3A3-201ENST00000373019 BACH1O14867 736 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 DIAPH2O60879 1101 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 MYBL1P10243 752 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 GHRP10912 638 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 FERP16591 822 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 TNFRSF8P28908 595 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 PPP1R7Q15435 360 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 GNPTABQ3T906 1256 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 SPATA4Q8NEY3 305 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ALS2CR12Q96Q35 445 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 PIDD1Q9HB75 910 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 STIM2Q9P246 746 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 KIF1AQ12756 1690 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 PES1O00541 588 aaKnown RBP10.63□□□□□ -0.71
SF3A3-201ENST00000373019 GCP02774 474 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ALADP13716 330 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 MAGEA8P43361 318 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ITIH3Q06033 890 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 CUL4BQ13620 913 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 SLMAPQ14BN4 828 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ATL2Q8NHH9 583 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 DACH1Q9UI36 760 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 RFX7Q2KHR2 1363 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 LRRC37A3O60309 1634 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 E7EWF7 191 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ZSCAN9O15535 394 aaPredicted RBP10.63□□□□□ -0.71
SF3A3-201ENST00000373019 STX17P56962 302 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 GRIN1Q05586 938 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 TEFQ10587 303 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
SF3A3-201ENST00000373019 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
SF3A3-201ENST00000373019 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms