RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 TEX13BQ9BXU2 312 aa26.77■■□□□ 1.88
COL9A2-201ENST00000372736 SLC38A10Q9HBR0 1119 aa26.77■■□□□ 1.88
COL9A2-201ENST00000372736 TMEM232C9JQI7 657 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 ATP2A1O14983 1001 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 FARP2O94887 1054 aaPredicted RBP26.76■■□□□ 1.87
COL9A2-201ENST00000372736 MCCP23508 829 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 COPB2P35606 906 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 CENPQQ7L2Z9 268 aaPredicted RBP26.76■■□□□ 1.87
COL9A2-201ENST00000372736 DPP9Q86TI2 863 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 CHMP4CQ96CF2 233 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 PLXNA1Q9UIW2 1896 aa26.76■■□□□ 1.87
COL9A2-201ENST00000372736 TFRCP02786 760 aaKnown RBP26.75■■□□□ 1.87
COL9A2-201ENST00000372736 FCER1AP12319 257 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 CAPN2P17655 700 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 CCND3P30281 292 aaPredicted RBP26.75■■□□□ 1.87
COL9A2-201ENST00000372736 STAT2P52630 851 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 MFSD14CQ5VZR4 134 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 SNRNP48Q6IEG0 339 aaKnown RBP26.75■■□□□ 1.87
COL9A2-201ENST00000372736 RCSD1Q6JBY9 416 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 CTNNA3Q9UI47 895 aa26.75■■□□□ 1.87
COL9A2-201ENST00000372736 ISY1Q9ULR0 285 aaKnown RBP26.75■■□□□ 1.87
COL9A2-201ENST00000372736 ZBED4O75132 1171 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 TOP1P11387 765 aaKnown RBP26.74■■□□□ 1.87
COL9A2-201ENST00000372736 IMMTQ16891 758 aaKnown RBP26.74■■□□□ 1.87
COL9A2-201ENST00000372736 PRPF38BQ5VTL8 546 aaKnown RBP26.74■■□□□ 1.87
COL9A2-201ENST00000372736 OLFML2BQ68BL8 750 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 KCTD1Q719H9 257 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 RUFY2Q8WXA3 655 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 ESR2Q92731 530 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 MMP19Q99542 508 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 TMEM47Q9BQJ4 181 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 RIPK3Q9Y572 518 aa26.74■■□□□ 1.87
COL9A2-201ENST00000372736 PLA2G6O60733 806 aa26.73■■□□□ 1.87
COL9A2-201ENST00000372736 FAM160B2Q86V87 743 aa26.73■■□□□ 1.87
COL9A2-201ENST00000372736 RAVER2Q9HCJ3 691 aaKnown RBP26.73■■□□□ 1.87
COL9A2-201ENST00000372736 CYP2C19P33261 490 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 NT5C2P49902 561 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 OAZ1P54368 228 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 SKAP1Q86WV1 359 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 CPXCR1Q8N123 301 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 CHURC1Q8WUH1 139 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 DCAF4Q8WV16 495 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 SLC5A4Q9NY91 659 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 MTMR7Q9Y216 660 aa26.72■■□□□ 1.87
COL9A2-201ENST00000372736 SGSM2O43147 1006 aa26.71■■□□□ 1.87
COL9A2-201ENST00000372736 KDM4AO75164 1064 aa26.71■■□□□ 1.87
COL9A2-201ENST00000372736 KCTD2Q14681 263 aa26.71■■□□□ 1.87
COL9A2-201ENST00000372736 MAML3Q96JK9 1138 aa26.71■■□□□ 1.87
COL9A2-201ENST00000372736 OGDHLQ9ULD0 1010 aa26.71■■□□□ 1.87
COL9A2-201ENST00000372736 CTDP1Q9Y5B0 961 aaPredicted RBP26.71■■□□□ 1.87
COL9A2-201ENST00000372736 B4E1Z4 1266 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 PGK2P07205 417 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 FDX1P10109 184 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 CYBAP13498 195 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 PTH1RQ03431 593 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 IKQ13123 557 aaPredicted RBP26.7■■□□□ 1.86
COL9A2-201ENST00000372736 CCDC96Q2M329 555 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.7■■□□□ 1.86
COL9A2-201ENST00000372736 ANKLE1Q8NAG6 615 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 TRPV1Q8NER1 839 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 TTC14Q96N46 770 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 ZKSCAN3Q9BRR0 538 aa26.7■■□□□ 1.86
COL9A2-201ENST00000372736 ZNF536O15090 1300 aa26.69■■□□□ 1.86
COL9A2-201ENST00000372736 MNX1P50219 401 aaPredicted RBP26.69■■□□□ 1.86
COL9A2-201ENST00000372736 LHX8Q68G74 356 aa26.69■■□□□ 1.86
COL9A2-201ENST00000372736 DIS3LQ8TF46 1054 aaKnown RBP26.69■■□□□ 1.86
COL9A2-201ENST00000372736 PDHBP11177 359 aa26.68■■□□□ 1.86
COL9A2-201ENST00000372736 ZNF792Q3KQV3 632 aa26.68■■□□□ 1.86
COL9A2-201ENST00000372736 PRR12Q9ULL5 1215 aa26.68■■□□□ 1.86
COL9A2-201ENST00000372736 ALPK3Q96L96 1907 aa26.68■■□□□ 1.86
COL9A2-201ENST00000372736 CEP290O15078 2479 aa26.67■■□□□ 1.86
COL9A2-201ENST00000372736 SLC4A3P48751 1232 aa26.67■■□□□ 1.86
COL9A2-201ENST00000372736 DIS3Q9Y2L1 958 aaKnown RBP26.67■■□□□ 1.86
COL9A2-201ENST00000372736 FRMPD2Q68DX3 1309 aaPredicted RBP26.66■■□□□ 1.86
COL9A2-201ENST00000372736 SNHG28P0DPA3 235 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 TTBK2Q6IQ55 1244 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 BTNL9Q6UXG8 535 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 IQCA1Q86XH1 822 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 DGKHQ86XP1 1220 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 CHST13Q8NET6 341 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 PAWRQ96IZ0 340 aaKnown RBP26.66■■□□□ 1.86
COL9A2-201ENST00000372736 KRT23Q9C075 422 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 CNNM2Q9H8M5 875 aa26.66■■□□□ 1.86
COL9A2-201ENST00000372736 DNAJC25-GNG10A0A024R161 153 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 SNAP25P60880 206 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 AGBL1Q96MI9 1066 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 ZSCAN10Q96SZ4 725 aaPredicted RBP26.65■■□□□ 1.86
COL9A2-201ENST00000372736 HTATIP2Q9BUP3 242 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 ZSWIM5Q9P217 1185 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 FBXO40Q9UH90 709 aa26.65■■□□□ 1.86
COL9A2-201ENST00000372736 DDX20Q9UHI6 824 aaKnown RBP26.65■■□□□ 1.86
COL9A2-201ENST00000372736 U3KPZ7 1027 aaPredicted RBP26.65■■□□□ 1.86
COL9A2-201ENST00000372736 CYP21A2P08686 494 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 SLC16A2P36021 539 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 ZNF543Q08ER8 600 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 CCDC178Q5BJE1 867 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 ENAHQ8N8S7 591 aaPredicted RBP26.64■■□□□ 1.86
COL9A2-201ENST00000372736 ANKS1AQ92625 1134 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 GPCPD1Q9NPB8 672 aa26.64■■□□□ 1.86
COL9A2-201ENST00000372736 HOMER2Q9NSB8 354 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms