RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 STK36Q9NRP7 1315 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 FAM155AB1AL88 458 aaPredicted RBP24■■□□□ 1.43
TSC22D3-205ENST00000372390 CETPP11597 493 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 SH3D19Q5HYK7 790 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 FAM184AQ8NB25 1140 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 CAPNS2Q96L46 248 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 C12orf42Q96LP6 360 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 RNF26Q9BY78 433 aaPredicted RBP24■■□□□ 1.43
TSC22D3-205ENST00000372390 TMEM232C9JQI7 657 aa23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 NOGQ13253 232 aa23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 PKN1Q16512 942 aa23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 FASTKD5Q7L8L6 764 aaKnown RBP23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 PROCA1Q8NCQ7 364 aaPredicted RBP23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 LOC285556D6RIA3 1793 aa23.99■■□□□ 1.43
TSC22D3-205ENST00000372390 MANSC4A6NHS7 340 aaPredicted RBP23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 PRPF3O43395 683 aaKnown RBP23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 VCAM1P19320 739 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 SYT1P21579 422 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 TRIM22Q8IYM9 498 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 LZTS2Q9BRK4 669 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 CCL15-CCL14A0A0B4J2E2 113 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 HTRA3P83110 453 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 CCL15Q16663 113 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 GADL1Q6ZQY3 521 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 ADGRF4Q8IZF3 695 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 RIOX1Q9H6W3 641 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 FBXO28Q9NVF7 368 aa23.98■■□□□ 1.43
TSC22D3-205ENST00000372390 LARP1BQ659C4 914 aaKnown RBP23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 OTUD7BQ6GQQ9 843 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 HOMER1Q86YM7 354 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 MS4A4AQ96JQ5 239 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 PIGSQ96S52 555 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 ALG1Q9BT22 464 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 JMJD4Q9H9V9 463 aa23.97■■□□□ 1.43
TSC22D3-205ENST00000372390 WDR46O15213 610 aaKnown RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 SNAP25P60880 206 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 GUCY1B3Q02153 619 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 SREBF2Q12772 1141 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 IKQ13123 557 aaPredicted RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 SHISA4Q96DD7 197 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 PARP14Q460N5 1801 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 DEXIO95424 95 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 AKAP17AQ02040 695 aaKnown RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 FOXD4L5Q5VV16 416 aaPredicted RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 FOXD4L4Q8WXT5 416 aaPredicted RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 RPAP3Q9H6T3 665 aaPredicted RBP23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 ZDHHC9Q9Y397 364 aa23.96■■□□□ 1.43
TSC22D3-205ENST00000372390 SMARCA1P28370 1054 aa23.95■■□□□ 1.42
TSC22D3-205ENST00000372390 SYDE2Q5VT97 1194 aa23.95■■□□□ 1.42
TSC22D3-205ENST00000372390 SAMD1Q6SPF0 538 aaPredicted RBP23.95■■□□□ 1.42
TSC22D3-205ENST00000372390 BTNL9Q6UXG8 535 aa23.95■■□□□ 1.42
TSC22D3-205ENST00000372390 AGTPBP1Q9UPW5 1226 aa23.95■■□□□ 1.42
TSC22D3-205ENST00000372390 STAT2P52630 851 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 BRI3BPQ8WY22 251 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 GPKOWQ92917 476 aaPredicted RBP eCLIP23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 CHMP5Q9NZZ3 219 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 WDR33Q9C0J8 1336 aaKnown RBP23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 RLFQ13129 1914 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 STX6O43752 255 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 INHBEP58166 350 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 PABPC4Q13310 644 aaKnown RBP eCLIP23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 RRP36Q96EU6 259 aaKnown RBP23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 TANGO6Q9C0B7 1094 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 PRR12Q9ULL5 1215 aa23.94■■□□□ 1.42
TSC22D3-205ENST00000372390 VPS37CA5D8V6 355 aaPredicted RBP23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 SCG2P13521 617 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 MOGSQ13724 837 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 PFKFB3Q16875 520 aaPredicted RBP23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 TREML2Q5T2D2 321 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 KIFC2Q96AC6 838 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 MTMR8Q96EF0 704 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 C8orf76Q96K31 380 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 CIZ1Q9ULV3 898 aaPredicted RBP23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 MTMR6Q9Y217 621 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 SMCHD1A6NHR9 2005 aa23.93■■□□□ 1.42
TSC22D3-205ENST00000372390 TESPA1A2RU30 521 aaPredicted RBP23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 VEGFBP49765 207 aa23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 REM2Q8IYK8 340 aaPredicted RBP23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 VPS54Q9P1Q0 977 aa23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 FEM1BQ9UK73 627 aa23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 KIF3AQ9Y496 699 aa23.92■■□□□ 1.42
TSC22D3-205ENST00000372390 PPP1R11O60927 126 aaPredicted RBP23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 PDCP20941 246 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 KIF23Q02241 960 aaPredicted RBP23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L15C9J2P7 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L13C9JLJ4 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L11C9JVI0 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L18D6R9N7 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L22D6RA61 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L17D6RBQ6 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L19D6RCP7 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L20D6RJB6 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 AOC2O75106 756 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 TAL1P17542 331 aaPredicted RBP23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 USP17L24Q0WX57 530 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 WWC2Q6AWC2 1192 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 TYW1BQ6NUM6 668 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 ANKRD23Q86SG2 305 aa23.91■■□□□ 1.42
TSC22D3-205ENST00000372390 CHURC1Q8WUH1 139 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms