RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
RAE1-201ENST00000371242 C16orf45Q96MC5 204 aaPredicted RBP12.66□□□□□ -0.38
RAE1-201ENST00000371242 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
RAE1-201ENST00000371242 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
RAE1-201ENST00000371242 KCNJ6P48051 423 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 TPD52L1Q16890 204 aaPredicted RBP12.65□□□□□ -0.38
RAE1-201ENST00000371242 VSTM4Q8IW00 320 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 MED15Q96RN5 788 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
RAE1-201ENST00000371242 MTMR4Q9NYA4 1195 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 GREB1LQ9C091 1923 aaPredicted RBP12.65□□□□□ -0.38
RAE1-201ENST00000371242 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 LAD1O00515 517 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 PDHBP11177 359 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 TNNT1P13805 278 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
RAE1-201ENST00000371242 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
RAE1-201ENST00000371242 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 NRDCO43847 1150 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 GNA11P29992 359 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 TXLNAP40222 546 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 NAPAP54920 295 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 INF2Q27J81 1249 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 TEKT1Q969V4 418 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 RIOX1Q9H6W3 641 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 USP40Q9NVE5 1235 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 CASP1P29466 404 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 PRPHP41219 470 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 CUL4BQ13620 913 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 C6orf50Q9HD87 102 aa12.64□□□□□ -0.39
RAE1-201ENST00000371242 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
RAE1-201ENST00000371242 ESYT2A0FGR8 921 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 G3V3G9 751 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 AKR1B1P15121 316 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 HOMER1Q86YM7 354 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 INTS13Q9NVM9 706 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 SCNN1DP51172 638 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 SPATA1Q5VX52 437 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 PIGSQ96S52 555 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 MTRQ99707 1265 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 TMEM60Q9H2L4 133 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
RAE1-201ENST00000371242 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
RAE1-201ENST00000371242 SLX4Q8IY92 1834 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
RAE1-201ENST00000371242 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
RAE1-201ENST00000371242 TTLL1O95922 423 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 FKBP1AP62942 108 aaKnown RBP12.62□□□□□ -0.39
RAE1-201ENST00000371242 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAE1-201ENST00000371242 SOGA3Q5TF21 947 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAE1-201ENST00000371242 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 DISC1Q9NRI5 854 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 SHMT1P34896 483 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 BAG6P46379 1132 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
RAE1-201ENST00000371242 STAMQ92783 540 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
RAE1-201ENST00000371242 SIPA1L1O43166 1804 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms