RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 GUCY1A3Q02108 690 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 PTGDRQ13258 359 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 RNF187Q5TA31 235 aaPredicted RBP10.81□□□□□ -0.68
LRRC40-201ENST00000370952 MFSD6Q6ZSS7 791 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 CREG2Q8IUH2 290 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 AMOTL1Q8IY63 956 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
LRRC40-201ENST00000370952 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 MYH2Q9UKX2 1941 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 B4DLN1 442 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 OPA1O60313 960 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 AKNAD1Q5T1N1 836 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 ZNF654Q8IZM8 581 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 BANK1Q8NDB2 785 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 PCMTD1Q96MG8 357 aaPredicted RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 ZIM3Q96PE6 472 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 CENPHQ9H3R5 247 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 NHEJ1Q9H9Q4 299 aaPredicted RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 MLXIPQ9HAP2 919 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 LRWD1Q9UFC0 647 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 CAPN6Q9Y6Q1 641 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 MEGF6O75095 1541 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 KIF1AQ12756 1690 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 MEFVO15553 781 aaPredicted RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 HSF2BPO75031 334 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 PLEKP08567 350 aaPredicted RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 CYLC1P35663 651 aaPredicted RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 PHKA1P46020 1223 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 NFRKBQ6P4R8 1299 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
LRRC40-201ENST00000370952 CAPN11Q9UMQ6 739 aa10.8□□□□□ -0.68
LRRC40-201ENST00000370952 TMEM94Q12767 1356 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 LGALS16A8MUM7 142 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 RPN1P04843 607 aaKnown RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 TRIM21P19474 475 aaKnown RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 KRT2P35908 639 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 SEC24CP53992 1094 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 NNTQ13423 1086 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 UBE3CQ15386 1083 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ZNF658Q5TYW1 1059 aaPredicted RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 PDXDC2PQ6P474 469 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 DONSONQ9NYP3 566 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 SNX12Q9UMY4 172 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ERICH2A1L162 156 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ZNF263O14978 683 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 NCK2O43639 380 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 MOCS3O95396 460 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 GPTP24298 496 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 SKOR1P84550 965 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 IFIT5Q13325 482 aaKnown RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 LDHAL6AQ6ZMR3 332 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 B4GALNT4Q76KP1 1039 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 MMGT1Q8N4V1 131 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 MAGEB6Q8N7X4 407 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 FERMT2Q96AC1 680 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 TCRBV5S4A2TA0A5A2 114 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ESYT3A0FGR9 886 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ANO9A1A5B4 782 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 GTPBP6O43824 516 aaPredicted RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 NAA35Q5VZE5 725 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ANKLE2Q86XL3 938 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 ZNF507Q8TCN5 953 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 TRIM47Q96LD4 638 aa10.79□□□□□ -0.68
LRRC40-201ENST00000370952 V9GY48 417 aaPredicted RBP10.79□□□□□ -0.68
LRRC40-201ENST00000370952 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 LSP1P33241 339 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 EPHB4P54760 987 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 ACTN3Q08043 901 aaPredicted RBP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 PKN1Q16512 942 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 HAUS3Q68CZ6 603 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 DCAF5Q96JK2 942 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 CCDC43Q96MW1 224 aaKnown RBP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 PLIN2Q99541 437 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 KRT23Q9C075 422 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 ZNHIT6Q9NWK9 470 aaKnown RBP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 NUP188Q5SRE5 1749 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 ATRNO75882 1429 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 H7C1D1 291 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
LRRC40-201ENST00000370952 FSBPO95073 299 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
LRRC40-201ENST00000370952 FAM153BP0C7A2 387 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms