RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GNAQP50148 359 aa18.11■□□□□ 0.49
PRPF38B-202ENST00000370022 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
PRPF38B-202ENST00000370022 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
PRPF38B-202ENST00000370022 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
PRPF38B-202ENST00000370022 MORF4L1Q9UBU8 362 aa18.11■□□□□ 0.49
PRPF38B-202ENST00000370022 VWA5AO00534 786 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 HSPA1AP0DMV8 641 aaKnown RBP18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 HSPA1BP0DMV9 641 aaKnown RBP18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 BCRP11274 1271 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 MICU3Q86XE3 530 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 FANCBQ8NB91 859 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 ATG4CQ96DT6 458 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 ZNF274Q96GC6 653 aaPredicted RBP18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 CPA4Q9UI42 421 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 PRR12Q9ULL5 1215 aa18.1■□□□□ 0.49
PRPF38B-202ENST00000370022 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 ZBED4O75132 1171 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 AK2P54819 239 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 SYDE2Q5VT97 1194 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 GPRC5AQ8NFJ5 357 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 SLC38A10Q9HBR0 1119 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 NID2Q14112 1375 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 RLFQ13129 1914 aa18.09■□□□□ 0.49
PRPF38B-202ENST00000370022 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 GPR25O00155 361 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 OAZ1P54368 228 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 STAG2Q8N3U4 1231 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 R3HDMLQ9H3Y0 253 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 PNMA2Q9UL42 364 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 A0A0G2JMZ2 1700 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 PARP14Q460N5 1801 aa18.08■□□□□ 0.49
PRPF38B-202ENST00000370022 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 ST18O60284 1047 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 SLC16A2P36021 539 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 CTCFP49711 727 aaPredicted RBP18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 METAP2P50579 478 aaKnown RBP eCLIP18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 ERVK-9P63128 1117 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 ERVK-24P63145 666 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 CCNA1P78396 465 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 RTN1Q16799 776 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 PAGR1Q9BTK6 254 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 TXNRD2Q9NNW7 524 aa18.08■□□□□ 0.48
PRPF38B-202ENST00000370022 GOLGA8AA7E2F4 631 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 RXRAP19793 462 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 PDIA3P30101 505 aaKnown RBP18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 SP3Q02447 781 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 POTEEQ6S8J3 1075 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 BTBD7Q9P203 1132 aa18.07■□□□□ 0.48
PRPF38B-202ENST00000370022 FOXN1O15353 648 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 FKTNO75072 461 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 CNMDO75829 334 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 COPB2P35606 906 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 TEX13BQ9BXU2 312 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 RIOX1Q9H6W3 641 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 ZNF214Q9UL59 606 aaPredicted RBP18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 HPS5Q9UPZ3 1129 aa18.06■□□□□ 0.48
PRPF38B-202ENST00000370022 DHX16O60231 1041 aaKnown RBP18.05■□□□□ 0.48
PRPF38B-202ENST00000370022 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
PRPF38B-202ENST00000370022 TSKSQ9UJT2 592 aa18.05■□□□□ 0.48
PRPF38B-202ENST00000370022 TPCN1Q9ULQ1 816 aa18.05■□□□□ 0.48
PRPF38B-202ENST00000370022 SLC25A27O95847 323 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 STAT3P40763 770 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 LACTBP83111 547 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 KIF22Q14807 665 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 Q3C1V9 767 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 SHCBP1Q8NEM2 672 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 ZNF296Q8WUU4 475 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 ERO1AQ96HE7 468 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 JMJD4Q9H9V9 463 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 ICAM1P05362 532 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 MAPK4P31152 587 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 MCM2P49736 904 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 TRAF1Q13077 416 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 PLS1Q14651 629 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 ARHGEF6Q15052 776 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 COL13A1Q5TAT6 717 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 RIOX2Q8IUF8 465 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms