RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 A1BGP04217 495 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 TRIM21P19474 475 aaKnown RBP18.89■□□□□ 0.62
DKC1-201ENST00000369550 ATP1A2P50993 1020 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 SLC7A5Q01650 507 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 KIF5AQ12840 1032 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 ZNF658Q5TYW1 1059 aaPredicted RBP18.89■□□□□ 0.62
DKC1-201ENST00000369550 ARL8AQ96BM9 186 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 GDAQ9Y2T3 454 aa18.89■□□□□ 0.62
DKC1-201ENST00000369550 ZNF335Q9H4Z2 1342 aaPredicted RBP18.89■□□□□ 0.61
DKC1-201ENST00000369550 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 hCG_1642624A0A1W2PR95 340 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 TRIM49BA6NDI0 452 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 A6NNZ2 444 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 LGALS16A8MUM7 142 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.61
DKC1-201ENST00000369550 PSEN1P49768 467 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 CYP27A1Q02318 531 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 TUBB8Q3ZCM7 444 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 NHEJ1Q9H9Q4 299 aaPredicted RBP18.89■□□□□ 0.61
DKC1-201ENST00000369550 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
DKC1-201ENST00000369550 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 RMND1Q9NWS8 449 aa18.89■□□□□ 0.61
DKC1-201ENST00000369550 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
DKC1-201ENST00000369550 H7C1D1 291 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 EPHB4P54760 987 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 PPARAQ07869 468 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 TTMPQ5BVD1 217 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 FKBP15Q5T1M5 1219 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 KCTD16Q68DU8 428 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 CEP83Q9Y592 693 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 ATRNO75882 1429 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 WNT7AO00755 349 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 GTPBP6O43824 516 aaPredicted RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 PRDM1O75626 825 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 PRCPP42785 496 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 PTGDRQ13258 359 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 MMGT1Q8N4V1 131 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 A0A1W2PQC6 194 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 MBD4O95243 580 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 RPN1P04843 607 aaKnown RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 TDO2P48775 406 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 CCDC96Q2M329 555 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 PCMTD1Q96MG8 357 aaPredicted RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 MAGEC2Q9UBF1 373 aaPredicted RBP18.88■□□□□ 0.61
DKC1-201ENST00000369550 TACC3Q9Y6A5 838 aa18.88■□□□□ 0.61
DKC1-201ENST00000369550 BCL9LQ86UU0 1499 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 RDXP35241 583 aaKnown RBP18.87■□□□□ 0.61
DKC1-201ENST00000369550 CCDC181Q5TID7 509 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 ALS2CLQ60I27 953 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 ZNF662Q6ZS27 426 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 SH2D3CQ8N5H7 860 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 FAM89AQ96GI7 184 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 UBAC1Q9BSL1 405 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 SNX12Q9UMY4 172 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 NID2Q14112 1375 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 EPB41P11171 864 aaKnown RBP18.87■□□□□ 0.61
DKC1-201ENST00000369550 SKOR1P84550 965 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 ALX1Q15699 326 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 TTC38Q5R3I4 469 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 EMBQ6PCB8 327 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 MICALCLQ6ZW33 695 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 SPATS2Q86XZ4 545 aaKnown RBP18.87■□□□□ 0.61
DKC1-201ENST00000369550 CREG2Q8IUH2 290 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 TMTC2Q8N394 836 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 TSEN2Q8NCE0 465 aaKnown RBP18.87■□□□□ 0.61
DKC1-201ENST00000369550 SPATA4Q8NEY3 305 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 PSMB7Q99436 277 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 ARMT1Q9H993 441 aa18.87■□□□□ 0.61
DKC1-201ENST00000369550 SPA17Q15506 151 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 MEA1Q16626 185 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 RNF187Q5TA31 235 aaPredicted RBP18.86■□□□□ 0.61
DKC1-201ENST00000369550 IRF2BP1Q8IU81 584 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 MTRQ99707 1265 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
DKC1-201ENST00000369550 POLD4Q9HCU8 107 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 CNNM1Q9NRU3 951 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
DKC1-201ENST00000369550 B4DLN1 442 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 NNTQ13423 1086 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 PDXDC2PQ6P474 469 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 TRIM58Q8NG06 486 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 GIMAP7Q8NHV1 300 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 SMCR8Q8TEV9 937 aaPredicted RBP18.86■□□□□ 0.61
DKC1-201ENST00000369550 TRIM47Q96LD4 638 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 ABCA3Q99758 1704 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 STIM2Q9P246 746 aa18.86■□□□□ 0.61
DKC1-201ENST00000369550 ATXN2Q99700 1313 aaKnown RBP18.85■□□□□ 0.61
DKC1-201ENST00000369550 MYH7P12883 1935 aa18.85■□□□□ 0.61
DKC1-201ENST00000369550 TACC1O75410 805 aa18.85■□□□□ 0.61
DKC1-201ENST00000369550 FSBPO95073 299 aa18.85■□□□□ 0.61
DKC1-201ENST00000369550 KRT14P02533 472 aa18.85■□□□□ 0.61
DKC1-201ENST00000369550 EEF1GP26641 437 aaKnown RBP18.85■□□□□ 0.61
DKC1-201ENST00000369550 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
DKC1-201ENST00000369550 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms