RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CEP104O60308 925 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 DMTNQ08495 405 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 USH1GQ495M9 461 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 FBXO38Q6PIJ6 1188 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 LRRC47Q8N1G4 583 aaKnown RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 B4DLN1 442 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 BTDP43251 543 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 EXOSC10Q01780 885 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 SCARF1Q14162 830 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CCDC25Q86WR0 208 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 USP27XA6NNY8 438 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 GTF2IP78347 998 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 TCP10Q12799 353 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 TUBGCP2Q9BSJ2 902 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 NSRP1Q9H0G5 558 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 NT5C3AQ9H0P0 336 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 PALLDQ8WX93 1383 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 SEMA3EO15041 775 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CDC27P30260 824 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 MTRF1LQ9UGC7 380 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 PTPREP23469 700 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 CLCN6P51797 869 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 PAK2Q13177 524 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
COPA-202ENST00000368069 NUCKS1Q9H1E3 243 aaKnown RBP12.97□□□□□ -0.33
COPA-202ENST00000368069 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 KIF28PB7ZC32 967 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 KIF4AO95239 1232 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 PLEKHA8P1O95397 391 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
COPA-202ENST00000368069 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
COPA-202ENST00000368069 PREX1Q8TCU6 1659 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 MAP2P11137 1827 aaKnown RBP12.96□□□□□ -0.33
COPA-202ENST00000368069 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 ENC1O14682 589 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
COPA-202ENST00000368069 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
COPA-202ENST00000368069 MYOM1P52179 1685 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 GCNT3O95395 438 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 GRIPAP1Q4V328 841 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 ZNF658Q5TYW1 1059 aaPredicted RBP12.96□□□□□ -0.34
COPA-202ENST00000368069 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.34
COPA-202ENST00000368069 OSBPL5Q9H0X9 879 aaPredicted RBP12.96□□□□□ -0.34
COPA-202ENST00000368069 LY9Q9HBG7 655 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 PDE11AQ9HCR9 933 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.34
COPA-202ENST00000368069 NAA30Q147X3 362 aaPredicted RBP12.95□□□□□ -0.34
COPA-202ENST00000368069 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
COPA-202ENST00000368069 TRIM31Q9BZY9 425 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 MRPL44Q9H9J2 332 aaKnown RBP12.95□□□□□ -0.34
COPA-202ENST00000368069 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
COPA-202ENST00000368069 FLOT1O75955 427 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 EEF1GP26641 437 aaKnown RBP12.95□□□□□ -0.34
COPA-202ENST00000368069 PPP1R7Q15435 360 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 MTUS1Q9ULD2 1270 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 STK36Q9NRP7 1315 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 KDM3AQ9Y4C1 1321 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 BUB1O43683 1085 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 MYCT1Q8N699 235 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 CCDC77Q9BR77 488 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
COPA-202ENST00000368069 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms