RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NOVP48745 357 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 FANCCQ00597 558 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 RASSF7Q02833 373 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 PTGDRQ13258 359 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 SEMA3FQ13275 785 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 CCDC144BQ3MJ40 725 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 PIK3AP1Q6ZUJ8 805 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 IQUBQ8NA54 791 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 MYRIPQ8NFW9 859 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 XPO4Q9C0E2 1151 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 KCNQ5Q9NR82 932 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 MAN1B1Q9UKM7 699 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 ZNF646O15015 1829 aaPredicted RBP15.93■□□□□ 0.14
USF1-202ENST00000368020 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
USF1-202ENST00000368020 FZD9O00144 591 aa15.93■□□□□ 0.14
USF1-202ENST00000368020 ORC2Q13416 577 aaPredicted RBP15.93■□□□□ 0.14
USF1-202ENST00000368020 SPECC1Q5M775 1068 aa15.93■□□□□ 0.14
USF1-202ENST00000368020 CERS5Q8N5B7 392 aa15.93■□□□□ 0.14
USF1-202ENST00000368020 ENOX1Q8TC92 643 aaKnown RBP15.93■□□□□ 0.14
USF1-202ENST00000368020 SYMPKQ92797 1274 aaKnown RBP15.93■□□□□ 0.14
USF1-202ENST00000368020 SEC63Q9UGP8 760 aaKnown RBP15.93■□□□□ 0.14
USF1-202ENST00000368020 DAGLAQ9Y4D2 1042 aa15.93■□□□□ 0.14
USF1-202ENST00000368020 KIF2AO00139 706 aaPredicted RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 SERPINC1P01008 464 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 SKILP12757 684 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 SFPQP23246 707 aaKnown RBP eCLIP15.92■□□□□ 0.14
USF1-202ENST00000368020 LMOD1P29536 600 aaPredicted RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 GNA11P29992 359 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 PRELPP51888 382 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 GRIN1Q05586 938 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 ZNF174Q15697 407 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 EARS2Q5JPH6 523 aaKnown RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 SH3RF1Q7Z6J0 888 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 FILIP1Q7Z7B0 1213 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 FOXP4Q8IVH2 680 aaPredicted RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 CCDC112Q8NEF3 446 aa15.92■□□□□ 0.14
USF1-202ENST00000368020 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
USF1-202ENST00000368020 FAM205CA6NFA0 338 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 KLRF2D3W0D1 207 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 GTF2F1P35269 517 aaKnown RBP eCLIP15.91■□□□□ 0.14
USF1-202ENST00000368020 MMP14P50281 582 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 UBASH3AP57075 661 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 HDLBPQ00341 1268 aaKnown RBP15.91■□□□□ 0.14
USF1-202ENST00000368020 CXCL9Q07325 125 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 LRMPQ12912 555 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 TNIP1Q15025 636 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 GPR162Q16538 588 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 HHIPL2Q6UWX4 724 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 KRT25Q7Z3Z0 450 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 DHX58Q96C10 678 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 CCP110O43303 1012 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 TUBB4AP04350 444 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 MYL1P05976 194 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 PRPHP41219 470 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 CIAPIN1Q6FI81 312 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
USF1-202ENST00000368020 MTERF4Q7Z6M4 381 aaKnown RBP15.91■□□□□ 0.14
USF1-202ENST00000368020 STAG2Q8N3U4 1231 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 PDILTQ8N807 584 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 SLC44A5Q8NCS7 719 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 C6orf50Q9HD87 102 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 PAXBP1Q9Y5B6 917 aa15.91■□□□□ 0.14
USF1-202ENST00000368020 ESYT2A0FGR8 921 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 M0R2N6 131 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 STXBP3O00186 592 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 PSMD14O00487 310 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 RAD17O75943 681 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 MCM7P33993 719 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 TMC6Q7Z403 805 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 HEATR3Q7Z4Q2 680 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 PAGE5Q96GU1 130 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 GMLQ99445 158 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 RMND1Q9NWS8 449 aa15.9■□□□□ 0.14
USF1-202ENST00000368020 HLA-DOAP06340 250 aa15.89■□□□□ 0.13
USF1-202ENST00000368020 EIF6P56537 245 aaKnown RBP15.89■□□□□ 0.13
USF1-202ENST00000368020 CFAP100Q494V2 611 aa15.89■□□□□ 0.13
USF1-202ENST00000368020 C17orf53Q8N3J3 647 aaPredicted RBP15.89■□□□□ 0.13
USF1-202ENST00000368020 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
USF1-202ENST00000368020 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
USF1-202ENST00000368020 HSD3B7Q9H2F3 369 aa15.89■□□□□ 0.13
USF1-202ENST00000368020 TTF2Q9UNY4 1162 aaKnown RBP15.89■□□□□ 0.13
USF1-202ENST00000368020 RPS12P25398 132 aaKnown RBP15.88■□□□□ 0.13
USF1-202ENST00000368020 CCZ1BP86790 482 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 CCZ1P86791 482 aaPredicted RBP15.88■□□□□ 0.13
USF1-202ENST00000368020 GABPAQ06546 454 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 DPYDQ12882 1025 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
USF1-202ENST00000368020 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
USF1-202ENST00000368020 CEP95Q96GE4 821 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 AK8Q96MA6 479 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms