RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ZNF765Q7L2R6 523 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 HDXQ7Z353 690 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 FAM161BQ96MY7 647 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 SIN3AQ96ST3 1273 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 THRAP3Q9Y2W1 955 aaKnown RBP7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 LRRC37A3O60309 1634 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 TRPM1Q7Z4N2 1603 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 SLIT3O75094 1523 aa7.37□□□□□ -1.23
RNU4-4P-201ENST00000364588 COL18A1P39060 1754 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 PEAK1Q9H792 1746 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 DCDC2CA8MYV0 355 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 OGFOD3Q6PK18 319 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 MPRIPQ6WCQ1 1025 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 TOM1L2Q6ZVM7 507 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 LGR6Q9HBX8 967 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 WNK3Q9BYP7 1800 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 AKAP12Q02952 1782 aa7.36□□□□□ -1.23
RNU4-4P-201ENST00000364588 BRD4O60885 1362 aaPredicted RBP7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 AATKQ6ZMQ8 1374 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 EVC2Q86UK5 1308 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 FAM87AP0C7U9 286 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 DDB1Q16531 1140 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 WIPI1Q5MNZ9 446 aaPredicted RBP7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 CDC37L1Q7L3B6 337 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 VSIG10LQ86VR7 867 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 ANGEL1Q9UNK9 670 aaKnown RBP7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 SNCAIPQ9Y6H5 919 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 OVOS2A0A0G2JMS6 1433 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 OVOS2A0A0J9YW53 1432 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 OVOS2Q6IE36 1432 aa7.35□□□□□ -1.23
RNU4-4P-201ENST00000364588 ROCK2O75116 1388 aaKnown RBP7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 USP31Q70CQ4 1352 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 PRAMEF27A3QJZ7 478 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 MED26O95402 600 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 CTSHP09668 335 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 HOXA10P31260 410 aaPredicted RBP7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 NTF4P34130 210 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 RING1Q06587 406 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 PWP1Q13610 501 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 MAP3K11Q16584 847 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 LRFN4Q6PJG9 635 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 PTF1AQ7RTS3 328 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 PLPPR2Q96GM1 343 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 CSADQ9Y600 493 aa7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 CPSF1Q10570 1443 aaKnown RBP7.34□□□□□ -1.23
RNU4-4P-201ENST00000364588 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 PRNPP04156 253 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 SEPT6Q14141 434 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 ARHGEF25Q86VW2 580 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 C12orf40Q86WS4 652 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 SHISA5Q8N114 240 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 ZNF507Q8TCN5 953 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 PPP1R1BQ9UD71 204 aaPredicted RBP7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 TACC3Q9Y6A5 838 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 RGPD3A6NKT7 1758 aaPredicted RBP7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 RGPD4Q7Z3J3 1758 aa7.33□□□□□ -1.24
RNU4-4P-201ENST00000364588 WNT11O96014 354 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 TAGLNQ01995 201 aaKnown RBP7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 CYFIP1Q7L576 1253 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 TOP6BLQ8N6T0 577 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 MARCH10Q8NA82 808 aaPredicted RBP7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 KCNH5Q8NCM2 988 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 SPON1Q9HCB6 807 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 MON2Q7Z3U7 1717 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 KTN1Q86UP2 1357 aaKnown RBP7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 NFAT5O94916 1531 aa7.32□□□□□ -1.24
RNU4-4P-201ENST00000364588 TTC21AQ8NDW8 1320 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PLSCR1O15162 318 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 KCNQ2O43526 872 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 ETF1P62495 437 aaKnown RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PTPN11Q06124 597 aaPredicted RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 INPP5AQ14642 412 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 TSNAXIP1Q2TAA8 658 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 ARMCX6Q7L4S7 300 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 CCDC84Q86UT8 332 aaPredicted RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PSMG3-AS1Q96PY0 264 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 PDGFDQ9GZP0 370 aaPredicted RBP7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 MKNK2Q9HBH9 465 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 LTN1O94822 1766 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 CASZ1Q86V15 1759 aa7.31□□□□□ -1.24
RNU4-4P-201ENST00000364588 LRIG2O94898 1065 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 BPNT1O95861 308 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 TFE3P19532 575 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms