RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 CPVLQ9H3G5 476 aa20.8■□□□□ 0.92
CCDC7-203ENST00000362006 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
CCDC7-203ENST00000362006 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
CCDC7-203ENST00000362006 CALML3P27482 149 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 MTMR2Q13614 643 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 KIAA1755Q5JYT7 1200 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 FAM83BQ5T0W9 1011 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 SYDE2Q5VT97 1194 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 GALNT17Q6IS24 598 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 FERMT3Q86UX7 667 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 C12orf42Q96LP6 360 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 NUP88Q99567 741 aaPredicted RBP20.79■□□□□ 0.92
CCDC7-203ENST00000362006 PHF20Q9BVI0 1012 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 BRMS1Q9HCU9 246 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 BARHL2Q9NY43 387 aa20.79■□□□□ 0.92
CCDC7-203ENST00000362006 ZBTB5O15062 677 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 SLC16A2P36021 539 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 PPATQ06203 517 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 CHADLQ6NUI6 762 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 ERO1BQ86YB8 467 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 GJB4Q9NTQ9 266 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 VPS54Q9P1Q0 977 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 GOLGA6L22H0YM25 854 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 KIF23Q02241 960 aaPredicted RBP20.78■□□□□ 0.92
CCDC7-203ENST00000362006 TRAF1Q13077 416 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 GNL2Q13823 731 aaKnown RBP20.78■□□□□ 0.92
CCDC7-203ENST00000362006 LDLRAD1Q5T700 205 aa20.78■□□□□ 0.92
CCDC7-203ENST00000362006 FOXP1Q9H334 677 aaPredicted RBP20.78■□□□□ 0.92
CCDC7-203ENST00000362006 ATL3Q6DD88 541 aa20.77■□□□□ 0.92
CCDC7-203ENST00000362006 HEATR3Q7Z4Q2 680 aa20.77■□□□□ 0.92
CCDC7-203ENST00000362006 EMILIN3Q9NT22 766 aa20.77■□□□□ 0.92
CCDC7-203ENST00000362006 TMOD4Q9NZQ9 345 aa20.77■□□□□ 0.92
CCDC7-203ENST00000362006 TRIM75PA6NK02 468 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 TRAF5O00463 557 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.91
CCDC7-203ENST00000362006 NLRP5P59047 1200 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 SH3D19Q5HYK7 790 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 WWC2Q6AWC2 1192 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 KCNJ14Q9UNX9 436 aa20.77■□□□□ 0.91
CCDC7-203ENST00000362006 STXBP3O00186 592 aa20.76■□□□□ 0.91
CCDC7-203ENST00000362006 PPP1R18Q6NYC8 613 aa20.76■□□□□ 0.91
CCDC7-203ENST00000362006 DIS3L2Q8IYB7 885 aaKnown RBP20.76■□□□□ 0.91
CCDC7-203ENST00000362006 SPDYE5A6NIY4 337 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 KRT2P35908 639 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
CCDC7-203ENST00000362006 PRR12Q9ULL5 1215 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 CXCL11O14625 94 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 PTMSP20962 102 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
CCDC7-203ENST00000362006 C2orf69Q8N8R5 385 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 ZNF408Q9H9D4 720 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 ELP3Q9H9T3 547 aa20.75■□□□□ 0.91
CCDC7-203ENST00000362006 ESYT2A0FGR8 921 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 VCAM1P19320 739 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 GNA11P29992 359 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 MCM4P33991 863 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 NAPAP54920 295 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 NFKBIBQ15653 356 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 MOB2Q70IA6 237 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 PRPF38AQ8NAV1 312 aaKnown RBP20.74■□□□□ 0.91
CCDC7-203ENST00000362006 ZNF396Q96N95 335 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-203ENST00000362006 GPBP1L1Q9HC44 474 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-203ENST00000362006 GBA2Q9HCG7 927 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-203ENST00000362006 C6orf50Q9HD87 102 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 FDX1P10109 184 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 HMGCS2P54868 508 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 KRT85P78386 507 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 PPIL2Q13356 520 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 CSPP1Q1MSJ5 1256 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 QRICH1Q2TAL8 776 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 DAGLBQ8NCG7 672 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 ZMYND12Q9H0C1 365 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 CFAP45Q9UL16 551 aa20.74■□□□□ 0.91
CCDC7-203ENST00000362006 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 BICD2Q8TD16 824 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 CLMNQ96JQ2 1002 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 SLF1Q9BQI6 1058 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 AMNQ9BXJ7 453 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 GLT8D2Q9H1C3 349 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 PCDHA4Q9UN74 947 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 MYH15Q9Y2K3 1946 aa20.73■□□□□ 0.91
CCDC7-203ENST00000362006 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 ITGBL1O95965 494 aaPredicted RBP20.72■□□□□ 0.91
CCDC7-203ENST00000362006 TANGO6Q9C0B7 1094 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 RPAP3Q9H6T3 665 aaPredicted RBP20.72■□□□□ 0.91
CCDC7-203ENST00000362006 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 KIF28PB7ZC32 967 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 CELF2O95319 508 aaKnown RBP20.72■□□□□ 0.91
CCDC7-203ENST00000362006 DNM1Q05193 864 aaKnown RBP20.72■□□□□ 0.91
CCDC7-203ENST00000362006 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 BLIDQ8IZY5 108 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 RANBP17Q9H2T7 1088 aaKnown RBP20.72■□□□□ 0.91
CCDC7-203ENST00000362006 KCNH4Q9UQ05 1017 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 TCHHQ07283 1943 aa20.72■□□□□ 0.91
CCDC7-203ENST00000362006 TRPM7Q96QT4 1865 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms