RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 LRRC47Q8N1G4 583 aaKnown RBP18.96■□□□□ 0.63
PDGFA-201ENST00000354513 MKL1Q969V6 931 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 TEX13BQ9BXU2 312 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 XPNPEP3Q9NQH7 507 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 MTMR4Q9NYA4 1195 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 CLIP2Q9UDT6 1046 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 PATL2C9JE40 543 aaKnown RBP18.95■□□□□ 0.62
PDGFA-201ENST00000354513 ATP2A1O14983 1001 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 ADAMTS4O75173 837 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 PGK1P00558 417 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
PDGFA-201ENST00000354513 GNAT2P19087 354 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 COPB2P35606 906 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 ZMYM1Q5SVZ6 1142 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 C1orf53Q5VUE5 145 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 TRIM43Q96BQ3 446 aaPredicted RBP18.95■□□□□ 0.62
PDGFA-201ENST00000354513 TACC3Q9Y6A5 838 aa18.95■□□□□ 0.62
PDGFA-201ENST00000354513 LAMA4Q16363 1823 aa18.94■□□□□ 0.62
PDGFA-201ENST00000354513 ADCY6O43306 1168 aa18.94■□□□□ 0.62
PDGFA-201ENST00000354513 SNAI1O95863 264 aaPredicted RBP18.94■□□□□ 0.62
PDGFA-201ENST00000354513 ITGB8P26012 769 aa18.94■□□□□ 0.62
PDGFA-201ENST00000354513 C9orf50Q5SZB4 431 aa18.94■□□□□ 0.62
PDGFA-201ENST00000354513 PRPF38AQ8NAV1 312 aaKnown RBP18.94■□□□□ 0.62
PDGFA-201ENST00000354513 LBHD1Q9BQE6 289 aaPredicted RBP18.94■□□□□ 0.62
PDGFA-201ENST00000354513 SLC38A10Q9HBR0 1119 aa18.94■□□□□ 0.62
PDGFA-201ENST00000354513 POTEB2H3BUK9 544 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 RARBP10826 455 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 IRX5P78411 483 aaPredicted RBP18.93■□□□□ 0.62
PDGFA-201ENST00000354513 MAMDC4Q6UXC1 1216 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 GMCL1P1Q8NEA9 526 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 NEDD1Q8NHV4 660 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 BADQ92934 168 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 GUCD1Q96NT3 240 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 RAVER2Q9HCJ3 691 aaKnown RBP18.93■□□□□ 0.62
PDGFA-201ENST00000354513 PRDM5Q9NQX1 630 aaPredicted RBP18.93■□□□□ 0.62
PDGFA-201ENST00000354513 STXBP5LQ9Y2K9 1186 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDGFA-201ENST00000354513 SYNRGQ9UMZ2 1314 aa18.93■□□□□ 0.62
PDGFA-201ENST00000354513 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 A0A1W2PQ45 241 aaPredicted RBP18.92■□□□□ 0.62
PDGFA-201ENST00000354513 A0A1W2PQY0 241 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 AKR1A1P14550 325 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 TLE2Q04725 743 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 SHHQ15465 462 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 CCDC129Q6ZRS4 1044 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 RASGRP2Q7LDG7 609 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 CPXCR1Q8N123 301 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 KIFC2Q96AC6 838 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 SYNPO2Q9UMS6 1093 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 SYNGAP1Q96PV0 1343 aa18.92■□□□□ 0.62
PDGFA-201ENST00000354513 GBF1Q92538 1859 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 TTLL1O95922 423 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 APPP05067 770 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 PPARAQ07869 468 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 CCSAPQ6IQ19 270 aaPredicted RBP18.91■□□□□ 0.62
PDGFA-201ENST00000354513 ZNF444Q8N0Y2 327 aaPredicted RBP18.91■□□□□ 0.62
PDGFA-201ENST00000354513 KLHDC9Q8NEP7 349 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 FSD1Q9BTV5 496 aa18.91■□□□□ 0.62
PDGFA-201ENST00000354513 MX1P20591 662 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 EPHB4P54760 987 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 FAM109BQ6ICB4 259 aaPredicted RBP18.9■□□□□ 0.62
PDGFA-201ENST00000354513 ZNF467Q7Z7K2 595 aaPredicted RBP18.9■□□□□ 0.62
PDGFA-201ENST00000354513 MSL3Q8N5Y2 521 aaKnown RBP18.9■□□□□ 0.62
PDGFA-201ENST00000354513 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 FEM1BQ9UK73 627 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 ZNF536O15090 1300 aa18.9■□□□□ 0.62
PDGFA-201ENST00000354513 ERC2O15083 957 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.61
PDGFA-201ENST00000354513 TFAP4Q01664 338 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 VPS53Q5VIR6 699 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 SLFN13Q68D06 897 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 RNF180Q86T96 592 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 NAPBQ9H115 298 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 IL17RBQ9NRM6 502 aa18.89■□□□□ 0.61
PDGFA-201ENST00000354513 ASTN1O14525 1302 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 ZBED4O75132 1171 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 TSPY3P0CV98 308 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 TSPY8P0CW00 308 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 BMP3P12645 472 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 OAZ1P54368 228 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 DDX11Q96FC9 970 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 ZNF287Q9HBT7 754 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.88■□□□□ 0.61
PDGFA-201ENST00000354513 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
PDGFA-201ENST00000354513 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
PDGFA-201ENST00000354513 A0A0C4DFX4 3053 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 KIAA0355O15063 1070 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 CTAGE5O15320 804 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 NMT2O60551 498 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 CLTBP09497 229 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 ACLYP53396 1101 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 CTDSPL2Q05D32 466 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 PDE4BQ07343 736 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms