RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TRANK1O15050 2925 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 PDE6AP16499 860 aa19.83■□□□□ 0.77
NECTIN1-202ENST00000340882 HOXD11P31277 338 aaPredicted RBP19.83■□□□□ 0.77
NECTIN1-202ENST00000340882 FAM184BQ9ULE4 1060 aa19.83■□□□□ 0.77
NECTIN1-202ENST00000340882 ELP1O95163 1332 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 CYP2D7A0A087X1C5 515 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 TCRBV5S4A2TA0A5A2 114 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 ASGR1P07306 291 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 BMP1P13497 986 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 CYP2C18P33260 490 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 TFF2Q03403 129 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 SLFNL1Q499Z3 407 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 SLC9C2Q5TAH2 1124 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 FAM126BQ8IXS8 530 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 ZHX1Q9UKY1 873 aaPredicted RBP19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 PPP1R9AQ9ULJ8 1098 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 RIPK3Q9Y572 518 aa19.82■□□□□ 0.76
NECTIN1-202ENST00000340882 UMODL1Q5DID0 1318 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 ZNF532Q9HCE3 1301 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 ARVCFO00192 962 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 IPO8O15397 1037 aaKnown RBP19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 PRKAB2O43741 272 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 DUSP11O75319 330 aaKnown RBP19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 EEF2P13639 858 aaKnown RBP19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 CST5P28325 142 aaPredicted RBP19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 TMEM199Q8N511 208 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 HERVK_113Q902F9 699 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 GLT1D1Q96MS3 346 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 SWAP70Q9UH65 585 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 MSRAQ9UJ68 235 aa19.81■□□□□ 0.76
NECTIN1-202ENST00000340882 PRRC2BQ5JSZ5 2229 aaKnown RBP19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 DNAJC25-GNG10A0A024R161 153 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 CTAGE5O15320 804 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 RABGGTBP53611 331 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 PSRC1Q6PGN9 363 aaPredicted RBP19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 MAMDC4Q6UXC1 1216 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 VTI1AQ96AJ9 217 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 SH2D4AQ9H788 454 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 ARMT1Q9H993 441 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 IL23AQ9NPF7 189 aa19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 GREB1LQ9C091 1923 aaPredicted RBP19.8■□□□□ 0.76
NECTIN1-202ENST00000340882 MROH7Q68CQ1 1323 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 SYNGAP1Q96PV0 1343 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 APBB1O00213 710 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 CD4P01730 458 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 MYOGP15173 224 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 CDK8P49336 464 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 KCNQ1P51787 676 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 RAB30Q15771 203 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 TMED8Q6PL24 325 aaPredicted RBP19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 AACSQ86V21 672 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 FGD4Q96M96 766 aa19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 NUP88Q99567 741 aaPredicted RBP19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 UPF3AQ9H1J1 476 aaKnown RBP19.79■□□□□ 0.76
NECTIN1-202ENST00000340882 A0A0U1RQG5 324 aaPredicted RBP19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 ACVR2BQ13705 512 aa19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 OTOP2Q7RTS6 562 aa19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 MICALL1Q8N3F8 863 aa19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 MSL3Q8N5Y2 521 aaKnown RBP19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 SLC28A3Q9HAS3 691 aa19.78■□□□□ 0.76
NECTIN1-202ENST00000340882 RAD21O60216 631 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 GJA9P57773 515 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 CCDC144BQ3MJ40 725 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 GNASQ5JWF2 1037 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 PCSK9Q8NBP7 692 aaKnown RBP19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 VWCEQ96DN2 955 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 EPHX3Q9H6B9 360 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 EXOC6BQ9Y2D4 811 aa19.77■□□□□ 0.76
NECTIN1-202ENST00000340882 FGBP02675 491 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 CHGBP05060 677 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 BEX3Q00994 111 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 C12orf60Q5U649 245 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 SNRNP48Q6IEG0 339 aaKnown RBP19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 DDX11Q96FC9 970 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 C1QTNF1Q9BXJ1 281 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 SCN5AQ14524 2016 aa19.76■□□□□ 0.75
NECTIN1-202ENST00000340882 MYH4Q9Y623 1939 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 RFXAPO00287 272 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 GOLIM4O00461 696 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 PTGS1P23219 599 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 COPB2P35606 906 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 C16orf86Q6ZW13 317 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 CCDC17Q96LX7 622 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 LRFN3Q9BTN0 628 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 TEX13BQ9BXU2 312 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 KATNBL1Q9H079 304 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 IL1RAPL2Q9NP60 686 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 ASTN1O14525 1302 aa19.75■□□□□ 0.75
NECTIN1-202ENST00000340882 MYH7P12883 1935 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 LRRC37A2A6NM11 1700 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 USP17L12C9JPN9 530 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms