RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 BIRC3Q13489 604 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 PTPN21Q16825 1174 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 FAM212AQ96EL1 285 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 FNBP1Q96RU3 617 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 DAAM2Q86T65 1068 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 GPBP1Q86WP2 473 aa17.43■□□□□ 0.38
HDAC5-202ENST00000336057 PIH1D3Q9NQM4 214 aaKnown RBP17.43■□□□□ 0.38
HDAC5-202ENST00000336057 RBL2Q08999 1139 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 SLC39A2Q9NP94 309 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
HDAC5-202ENST00000336057 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 SMYD4Q8IYR2 804 aaPredicted RBP17.42■□□□□ 0.38
HDAC5-202ENST00000336057 SRPRBQ9Y5M8 271 aaKnown RBP17.42■□□□□ 0.38
HDAC5-202ENST00000336057 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
HDAC5-202ENST00000336057 GTF2IP78347 998 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 TCP10Q12799 353 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 LAD1O00515 517 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 TUBGCP2Q9BSJ2 902 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 CUEDC2Q9H467 287 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 RABEP2Q9H5N1 569 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 MYO1AQ9UBC5 1043 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 EXOC7Q9UPT5 735 aa17.42■□□□□ 0.38
HDAC5-202ENST00000336057 XRCC5P13010 732 aaKnown RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 EEF1GP26641 437 aaKnown RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 INPP5BP32019 993 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 SLC35F6Q8N357 371 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 USP40Q9NVE5 1235 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 ZNF804BA4D1E1 1349 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 ATP5DP30049 168 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 SWAP70Q9UH65 585 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 TSPOAP1O95153 1857 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 RFX7Q2KHR2 1363 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 CYP27B1O15528 508 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 ATP8B1O43520 1251 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 COBLO75128 1261 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 STAMBPO95630 424 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 CFBP00751 764 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 VIMP08670 466 aaKnown RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 ATP1A3P13637 1013 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 BCRP11274 1271 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
HDAC5-202ENST00000336057 ZBTB16Q05516 673 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 MSANTD4Q8NCY6 345 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
HDAC5-202ENST00000336057 CEP152O94986 1710 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 B4DLN1 442 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 CCDC6Q16204 474 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 BTDP43251 543 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 MTMR3Q13615 1198 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 MCAMP43121 646 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 MAEAQ7L5Y9 396 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 CNOT6LQ96LI5 555 aaKnown RBP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 ARMCX3Q9UH62 379 aaPredicted RBP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 CRB1P82279 1406 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 CLUL1Q15846 466 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 CROCCP2Q86T23 111 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 JDP2Q8WYK2 163 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
HDAC5-202ENST00000336057 PANK4Q9NVE7 773 aa17.4■□□□□ 0.38
HDAC5-202ENST00000336057 PRPF3O43395 683 aaKnown RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 RASGRF1Q13972 1273 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 USP31Q70CQ4 1352 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ARID5BQ14865 1188 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 FAM26FQ5R3K3 315 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 DHTKD1Q96HY7 919 aaPredicted RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ARHGEF40Q8TER5 1519 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ATP2A2P16615 1042 aaKnown RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 STAT1P42224 750 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 SETDB1Q15047 1291 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ZNF658Q5TYW1 1059 aaPredicted RBP17.39■□□□□ 0.37
HDAC5-202ENST00000336057 TSNARE1Q96NA8 513 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 ATP2B4P23634 1241 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 RASGRP4Q8TDF6 673 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 AK8Q96MA6 479 aa17.39■□□□□ 0.37
HDAC5-202ENST00000336057 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
HDAC5-202ENST00000336057 ZNF365Q70YC5 407 aa17.38■□□□□ 0.37
HDAC5-202ENST00000336057 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
HDAC5-202ENST00000336057 TPH2Q8IWU9 490 aa17.38■□□□□ 0.37
HDAC5-202ENST00000336057 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms